WormBase Tree Display for Gene: WBGene00006560
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| WBGene00006560 | Evidence | Author_evidence | Woollard AS | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T26C11 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | tbx-41 | |||||||
| Sequence_name | T26C11.1 | ||||||||
| Molecular_name | T26C11.1a | ||||||||
| T26C11.1a.1 | |||||||||
| CE51597 | |||||||||
| T26C11.1b | |||||||||
| Other_name | CELE_T26C11.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | tbx-41 | ||||||||
| DB_info | Database | AceView | gene | XC485 | |||||
| WormQTL | gene | WBGene00006560 | |||||||
| WormFlux | gene | WBGene00006560 | |||||||
| NDB | locus_tag | CELE_T26C11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006560|UniProtKB=Q22813 | |||||||
| family | PTHR11267 | ||||||||
| NCBI | gene | 188917 | |||||||
| RefSeq | protein | NR_138513.1 | |||||||
| NM_075942.5 | |||||||||
| SwissProt | UniProtAcc | Q22813 | |||||||
| UniProt_GCRP | UniProtAcc | Q22813 | |||||||
| RNAcentral | URSid | URS00009F0886 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tbx | ||||||||
| Allele (40) | |||||||||
| Strain | WBStrain00031888 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog | chrX_pilon.g18520 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell fate specification and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T26C11.1a | |||||||
| Corresponding_CDS_history | T26C11.1:wp253 | ||||||||
| Corresponding_transcript | T26C11.1b | ||||||||
| T26C11.1a.1 | |||||||||
| Associated_feature | WBsf1004167 | ||||||||
| WBsf235352 | |||||||||
| Transcription_factor | WBTranscriptionFactor000583 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00019245 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054180 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026500 | ||||||||
| Expr1157722 | |||||||||
| Expr2017356 | |||||||||
| Expr2035493 | |||||||||
| Drives_construct | WBCnstr00034301 | ||||||||
| Construct_product | WBCnstr00034301 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (21) | |||||||||
| Interaction | WBInteraction000181232 | ||||||||
| WBInteraction000213585 | |||||||||
| WBInteraction000291152 | |||||||||
| WBInteraction000426059 | |||||||||
| Map_info | Map | X | Position | -17.4557 | Error | 0.034436 | |||
| Positive | Positive_clone | T26C11 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5037 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024194 | ||||||||
| WBPaper00027309 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
