WormBase Tree Display for Gene: WBGene00006397
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| WBGene00006397 | SMap | S_parent | Sequence | C14A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | taf-13 | |||||||
| Sequence_name | C14A4.10 | ||||||||
| Molecular_name | C14A4.10 | ||||||||
| C14A4.10.1 | |||||||||
| CE33030 | |||||||||
| Other_name | CELE_C14A4.10 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | taf-13 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | taf | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01498435 | |||||||||
| WBVar00763692 | |||||||||
| WBVar00763693 | |||||||||
| WBVar00763694 | |||||||||
| WBVar00763695 | |||||||||
| WBVar01498940 | |||||||||
| WBVar01499862 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00059747 | ||||||||
| 00059748 | |||||||||
| 00059749 | |||||||||
| 00059750 | |||||||||
| 00114028 | |||||||||
| 00114029 | |||||||||
| Contained_in_operon | CEOP2693 | ||||||||
| CEOP2704 | |||||||||
| Ortholog (36) | |||||||||
| Structured_description | Concise_description | taf-13 encodes a predicted member of the transcription initiation factor IID, 18kDa subunit family with similarity to Drosophila Taf13. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable protein heterodimerization activity. Predicted to be involved in transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIID complex. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 60. Is an ortholog of human TAF13 (TATA-box binding protein associated factor 13). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081222 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11546) | ||||
| Molecular_info | Corresponding_CDS | C14A4.10 | |||||||
| Corresponding_CDS_history | C14A4.10:wp93 | ||||||||
| Corresponding_transcript | C14A4.10.1 | ||||||||
| Other_sequence (51) | |||||||||
| Associated_feature | WBsf223821 | ||||||||
| Transcription_factor | WBTranscriptionFactor000206 | ||||||||
| WBTranscriptionFactor000721 | |||||||||
| Experimental_info | Expr_pattern | Expr1025548 | |||||||
| Expr1032594 | |||||||||
| Expr1144531 | |||||||||
| Expr2017210 | |||||||||
| Expr2035346 | |||||||||
| Drives_construct | WBCnstr00034371 | ||||||||
| Construct_product | WBCnstr00034371 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (56) | |||||||||
| Interaction (56) | |||||||||
| Map_info | Map | II | Position | 3.12109 | |||||
| Positive | Positive_clone | C14A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004890 | ||||||||
| WBPaper00027309 | |||||||||
| WBPaper00029038 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from [source: A Walker] | ||||||||
| This gene was previously called taf-6. 02/06/14 krb. | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
