WormBase Tree Display for Gene: WBGene00006390
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| WBGene00006390 | SMap | S_parent | Sequence | ZK1320 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | taf-8 | |||||||
| Sequence_name | ZK1320.12 | ||||||||
| Molecular_name | ZK1320.12a | ||||||||
| ZK1320.12a.1 | |||||||||
| CE29942 | |||||||||
| ZK1320.12b | |||||||||
| CE35154 | |||||||||
| ZK1320.12b.1 | |||||||||
| Other_name | CELE_ZK1320.12 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | taf-8 | ||||||||
| DB_info | Database | AceView | gene | 2J961 | |||||
| WormQTL | gene | WBGene00006390 | |||||||
| WormFlux | gene | WBGene00006390 | |||||||
| NDB | locus_tag | CELE_ZK1320.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006390|UniProtKB=Q7YTH5 | |||||||
| family | PTHR46469 | ||||||||
| NCBI | gene | 174524 | |||||||
| RefSeq | protein | NM_001027342.5 | |||||||
| NM_001027343.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF316311 | |||||||
| TrEMBL | UniProtAcc | Q8WQ97 | |||||||
| Q7YTH5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q7YTH5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | taf | ||||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082502 | ||||||||
| 00082503 | |||||||||
| 00082504 | |||||||||
| 00082505 | |||||||||
| 00114004 | |||||||||
| 00114005 | |||||||||
| Ortholog (30) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein heterodimerization activity. Predicted to be involved in transcription initiation at RNA polymerase II promoter. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIID complex. Is an ortholog of human TAF8 (TATA-box binding protein associated factor 8). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1320.12a | |||||||
| ZK1320.12b | |||||||||
| Corresponding_CDS_history | ZK1320.12:wp106 | ||||||||
| Corresponding_transcript | ZK1320.12a.1 | ||||||||
| ZK1320.12b.1 | |||||||||
| Associated_feature | WBsf644580 | ||||||||
| WBsf221916 | |||||||||
| WBsf221917 | |||||||||
| WBsf221918 | |||||||||
| WBsf221919 | |||||||||
| Transcription_factor | WBTranscriptionFactor000435 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00059232 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1022171 | ||||||||
| Expr1032587 | |||||||||
| Expr1162661 | |||||||||
| Expr2017220 | |||||||||
| Expr2035356 | |||||||||
| Drives_construct | WBCnstr00034377 | ||||||||
| Construct_product | WBCnstr00034377 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | II | Position | 1.64205 | Error | 0.002295 | |||
| Positive | Positive_clone | ZK1320 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00029038 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
