WormBase Tree Display for Gene: WBGene00006049

WBGene00006049 SMap: S_parent: Sequence: F32B6
  Identity: Version: 1
    Name: CGC_name: ssp-32 Person_evidence: WBPerson680
      Sequence_name: F32B6.7
      Molecular_name: F32B6.7
        F32B6.7.1
        CE09862
      Other_name: CELE_F32B6.7 Accession_evidence: NDB BX284604
      Public_name: ssp-32
    DB_info: Database: AceView gene 4K661
        WormQTL gene WBGene00006049
        WormFlux gene WBGene00006049
        NDB locus_tag CELE_F32B6.7
        Panther gene CAEEL|WormBase=WBGene00006049|UniProtKB=O45433
          family PTHR22947
        NCBI gene 191963
        RefSeq protein NM_069381.5
        SwissProt UniProtAcc O45433
        UniProt_GCRP UniProtAcc O45433
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:39 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ssp
    Allele (14)
    RNASeq_FPKM (74)
    Ortholog (24)
    Paralog (33)
    Structured_description: Automated_description: Enriched in germ line based on RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by nine chemicals including methylmercuric chloride; antimycin; and cholesterol based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Major sperm protein (MSP) domain; MSP (Major sperm protein) domain; PapD-like superfamily; and Immunoglobulin-like fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F32B6.7
    Corresponding_transcript: F32B6.7.1
    Other_sequence: JI215713.1
      JI210764.1
      CJC02871_1
    Associated_feature: WBsf997496
      WBsf997497
      WBsf997498
      WBsf1018016
      WBsf1018017
      WBsf1018018
      WBsf228899
  Experimental_info: RNAi_result: WBRNAi00053268 Inferred_automatically: RNAi_primary
      WBRNAi00027314 Inferred_automatically: RNAi_primary
      WBRNAi00025355 Inferred_automatically: RNAi_primary
      WBRNAi00046118 Inferred_automatically: RNAi_primary
      WBRNAi00014209 Inferred_automatically: RNAi_primary
      WBRNAi00031668 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1026750
      Expr1150001
      Expr2035083
    Drives_construct: WBCnstr00034575
    Construct_product: WBCnstr00034575
    Microarray_results: SMD_F32B6.7
      A_12_P115558
      A_12_P132595
      Aff_F32B6.7
      GPL14144_F32B6.7_257-316_0.952_1_A
      GPL3518_CE09862
      GPL8304_CE_WBGene00006049_A
      GPL8304_CE_WBGene00006049_B
      GPL9450_F32B6.7
      cea2.d.23009
    Expression_cluster (59)
    Interaction: WBInteraction000383904
      WBInteraction000434024
  Map_info: Map: IV Position: 4.44118 Error: 0.000735
    Positive: Positive_clone: F32B6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00024421
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene