WormBase Tree Display for Gene: WBGene00006017
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| WBGene00006017 | SMap | S_parent | Sequence | T08G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srx-126 | Person_evidence | WBPerson522 | |||||
| Sequence_name | T08G3.9 | ||||||||
| Molecular_name | T08G3.9 | ||||||||
| Other_name | CELE_T08G3.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srx-126 | ||||||||
| DB_info | Database | AceView | gene | 5Q949 | |||||
| WormQTL | gene | WBGene00006017 | |||||||
| NDB | locus_tag | CELE_T08G3.9 | |||||||
| NCBI | gene | 13217452 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | srx | ||||||||
| Allele (59) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Paralog | WBGene00006020 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| Structured_description | Automated_description | Enriched in sensory neurons based on RNA-seq studies. Is affected by clk-1 and sir-2.1 based on microarray studies. Is affected by dafa#1 and allantoin based on microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS_history | T08G3.9:wp117 | |||||||
| Corresponding_pseudogene | T08G3.9 | ||||||||
| Experimental_info | Microarray_results | SMD_T08G3.9 | |||||||
| 179440_at | |||||||||
| A_12_P115908 | |||||||||
| Aff_T08G3.9 | |||||||||
| GPL19516_CGZ0034268 | |||||||||
| GPL21109_T08G3.9 | |||||||||
| GPL9450_T08G3.9 | |||||||||
| cea2.i.44105 | |||||||||
| Expression_cluster | WBPaper00032528:L3_depleted | ||||||||
| WBPaper00045774:clk-1_downregulated | |||||||||
| WBPaper00045774:clk-1_downregulated_CoQ10_independent | |||||||||
| WBPaper00060661:sensory-neuron_enriched | |||||||||
| WBPaper00061527:srj-21-srh-32 | |||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | |||||||||
| WBPaper00046548:dafachronic-acid_upregulated | |||||||||
| WBPaper00048989:N2_allantoin_upregulated | |||||||||
| Map_info | Map | V | Position | 10.1163 | Error | 0.003623 | |||
| Positive | Positive_clone | T08G3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
