WormBase Tree Display for Gene: WBGene00005893
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| WBGene00005893 | SMap | S_parent | Sequence | R03H4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srx-2 | Person_evidence | WBPerson522 | |||||
| Sequence_name | R03H4.2 | ||||||||
| Molecular_name | R03H4.2 | ||||||||
| R03H4.2.1 | |||||||||
| CE07405 | |||||||||
| Other_name | CELE_R03H4.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srx-2 | ||||||||
| DB_info | Database | AceView | gene | 5J487 | |||||
| WormQTL | gene | WBGene00005893 | |||||||
| WormFlux | gene | WBGene00005893 | |||||||
| NDB | locus_tag | CELE_R03H4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005893|UniProtKB=Q21685 | |||||||
| family | PTHR22718 | ||||||||
| NCBI | gene | 187548 | |||||||
| RefSeq | protein | NM_072929.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315320 | |||||||
| TrEMBL | UniProtAcc | Q21685 | |||||||
| UniProt_GCRP | UniProtAcc | Q21685 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srx | ||||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00072374 | ||||||||
| Ortholog (44) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R03H4.2 | |||||||
| Corresponding_transcript | R03H4.2.1 | ||||||||
| Associated_feature | WBsf232192 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00051205 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017377 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016344 | ||||||||
| Expr1154910 | |||||||||
| Expr2016826 | |||||||||
| Expr2034996 | |||||||||
| Drives_construct | WBCnstr00034668 | ||||||||
| Construct_product | WBCnstr00034668 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (67) | |||||||||
| Interaction | WBInteraction000230086 | ||||||||
| WBInteraction000298738 | |||||||||
| WBInteraction000315416 | |||||||||
| WBInteraction000339443 | |||||||||
| WBInteraction000345585 | |||||||||
| WBInteraction000394749 | |||||||||
| WBInteraction000454573 | |||||||||
| Map_info | Map | V | Position | 1.90478 | Error | 0.00027 | |||
| Positive | Positive_clone | R03H4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5029 | |||||||
| 5342 | |||||||||
| 5392 | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
