WormBase Tree Display for Gene: WBGene00005878
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| WBGene00005878 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K12D9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | srw-131 | Person_evidence | WBPerson522 | |||||
| Sequence_name | K12D9.13 | ||||||||
| Molecular_name | K12D9.13 | ||||||||
| Other_name | CELE_K12D9.13 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srw-131 | ||||||||
| DB_info | Database | AceView | gene | 5D480 | |||||
| NDB | locus_tag | CELE_K12D9.13 | |||||||
| NCBI | gene | 13212126 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | srw | ||||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Paralog | WBGene00005877 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| Structured_description | Automated_description | Is affected by clk-1; etr-1; and sir-2.1 based on microarray and RNA-seq studies. Is affected by adsorbable organic bromine compound and allantoin based on microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_pseudogene | K12D9.13 | |||||||
| Associated_feature | WBsf668826 | ||||||||
| Experimental_info | Microarray_results | SMD_K12D9.10 | |||||||
| 184793_at | |||||||||
| A_12_P152165 | |||||||||
| Aff_K12D9.10 | |||||||||
| GPL19516_CGZ0029369 | |||||||||
| GPL21109_K12D9.13 | |||||||||
| GPL9450_K12D9.10 | |||||||||
| cea2.i.41854 | |||||||||
| Expression_cluster | WBPaper00032528:L3_depleted | ||||||||
| WBPaper00045774:clk-1_downregulated | |||||||||
| WBPaper00050726:starvation_regulated_LowSalt | |||||||||
| WBPaper00061527:srj-42-srw-113 | |||||||||
| WBPaper00062325:muscle_depleted_noncoding-RNA | |||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | |||||||||
| WBPaper00046853:AOBr_M.aeruginosa-batch-culture_upregulated | |||||||||
| WBPaper00048989:N2_allantoin_upregulated | |||||||||
| Map_info | Map | V | Position | -12.7973 | |||||
| Positive | Positive_clone | K12D9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
