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WormBase Tree Display for Gene: WBGene00005706

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Name Class

WBGene00005706EvidencePerson_evidenceWBPerson522
SMapS_parentSequenceF23B12
IdentityVersion1
NameCGC_namesru-43Person_evidenceWBPerson522
Sequence_nameF23B12.2
Molecular_nameF23B12.2
Other_nameCELE_F23B12.2Accession_evidenceNDBBX284605
Public_namesru-43
DB_infoDatabaseAceViewgene5O914
WormQTLgeneWBGene00005706
NDBlocus_tagCELE_F23B12.2
NCBIgene13216553
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:38WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0000336
Gene_classsru
Allele (18)
RNASeq_FPKM (74)
ParalogWBGene00005707Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
Structured_descriptionAutomated_descriptionIs affected by eat-2 and sir-2.1 based on RNA-seq and microarray studies. Is affected by Rifampin; Psoralens; and Sirolimus based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDS_historyF23B12.2:wp105
Corresponding_pseudogeneF23B12.2
Experimental_infoMicroarray_resultsSMD_F23B12.2
183338_at
A_12_P157055
A_12_P157056
Aff_F23B12.2
GPL3518_CE09594
GPL9450_F23B12.2
cea2.i.37443
Expression_cluster (11)
Map_infoMapVPosition6.32736Error0.00826
PositivePositive_cloneF23B12Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
RemarkThis gene was previously incorrectly associated with F32B12.2 [krb 030424]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene