WormBase Tree Display for Gene: WBGene00005576
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| WBGene00005576 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F13A7 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sri-64 | Person_evidence | WBPerson522 | |||||
| Sequence_name | F13A7.6 | ||||||||
| Molecular_name | F13A7.6 | ||||||||
| Other_name | CELE_F13A7.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | sri-64 | ||||||||
| DB_info | Database | AceView | gene | 5Q862 | |||||
| WormQTL | gene | WBGene00005576 | |||||||
| NDB | locus_tag | CELE_F13A7.6 | |||||||
| NCBI | gene | 13217415 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | sri | ||||||||
| Allele (60) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Paralog | WBGene00005577 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| Structured_description | Automated_description | Is affected by hmg-3 and sir-2.1 based on RNA-seq and microarray studies. Is affected by paraquat based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS_history | F13A7.6:wp98 | |||||||
| Corresponding_pseudogene | F13A7.6 | ||||||||
| Experimental_info | Microarray_results | SMD_F13A7.6 | |||||||
| 178090_at | |||||||||
| A_12_P135671 | |||||||||
| Aff_F13A7.6 | |||||||||
| GPL19516_CGZ0015799 | |||||||||
| GPL21109_F13A7.6 | |||||||||
| GPL3518_CE15812 | |||||||||
| Expression_cluster | WBPaper00033070:Rhine_downregulated | ||||||||
| WBPaper00055013:hmg-3(bar24)_upregulated | |||||||||
| WBPaper00059987:Wounding_upregulated | |||||||||
| WBPaper00061527:srj-42-srw-113 | |||||||||
| WBPaper00064716:paraquat_downregulated | |||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | |||||||||
| Map_info | Map | V | Position | 10.0283 | Error | 0.001545 | |||
| Positive | Positive_clone | F13A7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
