WormBase Tree Display for Gene: WBGene00005554
expand all nodes | collapse all nodes | view schema
| WBGene00005554 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T10D4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sri-42 | Person_evidence | WBPerson522 | |||||
| Sequence_name | T10D4.9 | ||||||||
| Molecular_name | T10D4.9 | ||||||||
| T10D4.9.1 | |||||||||
| CE20049 | |||||||||
| Other_name | CELE_T10D4.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sri-42 | ||||||||
| DB_info | Database | AceView | gene | 2D428 | |||||
| WormQTL | gene | WBGene00005554 | |||||||
| WormFlux | gene | WBGene00005554 | |||||||
| NDB | locus_tag | CELE_T10D4.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005554|UniProtKB=Q9TZE9 | |||||||
| family | PTHR45830 | ||||||||
| NCBI | gene | 191915 | |||||||
| RefSeq | protein | NM_062056.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315276 | |||||||
| TrEMBL | UniProtAcc | Q9TZE9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TZE9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sri | ||||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00098016 | ||||||||
| Ortholog | WBGene00137965 | Caenorhabditis japonica | From_analysis | OMA | |||||
| WBGene00163759 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00125742 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
| WBGene00068097 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00124687 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
| chrII_pilon.g3873 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (292) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10D4.9 | |||||||
| Corresponding_transcript | T10D4.9.1 | ||||||||
| Associated_feature | WBsf1011840 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00018549 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053048 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1156650 | ||||||||
| Expr2016547 | |||||||||
| Expr2034746 | |||||||||
| Drives_construct | WBCnstr00034888 | ||||||||
| Construct_product | WBCnstr00034888 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (14) | |||||||||
| Interaction (147) | |||||||||
| Map_info | Map | II | Position | -8.25745 | Error | 0.015501 | |||
| Positive | Positive_clone | T10D4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
