WormBase Tree Display for Gene: WBGene00005552
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| WBGene00005552 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y27F2A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sri-40 | Person_evidence | WBPerson522 | |||||
| Sequence_name | Y27F2A.3 | ||||||||
| Molecular_name | Y27F2A.3 | ||||||||
| Y27F2A.3.1 | |||||||||
| CE37166 | |||||||||
| Other_name | Y27F2A.h | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y27F2A.3 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | sri-40 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00005552 | |||||
| WormFlux | gene | WBGene00005552 | |||||||
| NDB | locus_tag | CELE_Y27F2A.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005552|UniProtKB=Q9N549 | |||||||
| family | PTHR45830 | ||||||||
| NCBI | gene | 191914 | |||||||
| RefSeq | protein | NM_001027250.4 | |||||||
| TrEMBL | UniProtAcc | Q9N549 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N549 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sri | ||||||||
| Allele (66) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00095074 | ||||||||
| Ortholog (29) | |||||||||
| Paralog (293) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y27F2A.3 | |||||||
| Corresponding_CDS_history | Y27F2A.3:wp97 | ||||||||
| Y27F2A.3:wp127 | |||||||||
| Y27F2A.3:wp140 | |||||||||
| Y27F2A.3b:wp249 | |||||||||
| Corresponding_transcript | Y27F2A.3.1 | ||||||||
| Associated_feature | WBsf220988 | ||||||||
| WBsf220989 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036748 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055756 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020154 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010895 | ||||||||
| Expr1159287 | |||||||||
| Expr2016546 | |||||||||
| Expr2034745 | |||||||||
| Drives_construct | WBCnstr00034889 | ||||||||
| Construct_product | WBCnstr00034889 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (191) | |||||||||
| Map_info | Map | II | Position | -8.03859 | Error | 0.022123 | |||
| Positive | Positive_clone | Y27F2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029437 | ||||||||
| WBPaper00065315 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
