WormBase Tree Display for Gene: WBGene00005545
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| WBGene00005545 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y27F2A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sri-33 | Person_evidence | WBPerson522 | |||||
| Sequence_name | Y27F2A.4 | ||||||||
| Molecular_name | Y27F2A.4 | ||||||||
| Y27F2A.4.1 | |||||||||
| CE53869 | |||||||||
| Other_name | Y27F2A.g | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y27F2A.4 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | sri-33 | ||||||||
| DB_info | Database | AceView | gene | 2D440 | |||||
| WormQTL | gene | WBGene00005545 | |||||||
| WormFlux | gene | WBGene00005545 | |||||||
| NDB | locus_tag | CELE_Y27F2A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005545|UniProtKB=Q966C4 | |||||||
| family | PTHR45830 | ||||||||
| NCBI | gene | 191908 | |||||||
| RefSeq | protein | NM_001377746.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315276 | |||||||
| TrEMBL | UniProtAcc | Q966C4 | |||||||
| UniProt_GCRP | UniProtAcc | Q966C4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sri | ||||||||
| Allele (84) | |||||||||
| Strain | WBStrain00003688 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00090856 | ||||||||
| Ortholog (17) | |||||||||
| Paralog (292) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y27F2A.4 | |||||||
| Corresponding_CDS_history | Y27F2A.4:wp274 | ||||||||
| Corresponding_transcript | Y27F2A.4.1 | ||||||||
| Associated_feature | WBsf665420 | ||||||||
| WBsf987159 | |||||||||
| WBsf1011842 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055757 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr6915 | ||||||||
| Expr1019646 | |||||||||
| Expr1159288 | |||||||||
| Expr2016544 | |||||||||
| Drives_construct | WBCnstr00004124 | ||||||||
| WBCnstr00034894 | |||||||||
| Construct_product | WBCnstr00034894 | ||||||||
| Microarray_results | 189357_s_at | ||||||||
| 189421_at | |||||||||
| GPL14144_Y27F2A.4_380-439_0.884_14_A | |||||||||
| GPL19516_CGZ0043663 | |||||||||
| GPL19516_CGZ0043666 | |||||||||
| GPL21109_Y27F2A.4 | |||||||||
| GPL21109_Y27F2A.7 | |||||||||
| GPL8673_Y27F2A_4P00260 | |||||||||
| GPL8673_Y27F2A_4P00886 | |||||||||
| GPL8673_Y27F2A_4P00901 | |||||||||
| Expression_cluster (24) | |||||||||
| Map_info | Map | II | Position | -8.17322 | Error | 0.010969 | |||
| Positive | Positive_clone | Y27F2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
