WormBase Tree Display for Gene: WBGene00005496

WBGene00005496 SMap: S_parent: Sequence: Y94A7B
  Identity: Version: 1
    Name: CGC_name: srh-292 Person_evidence: WBPerson522
      Sequence_name: Y94A7B.1
      Molecular_name: Y94A7B.1
        Y94A7B.1.1
        CE34439
      Other_name: CELE_Y94A7B.1 Accession_evidence: NDB BX284605
      Public_name: srh-292
    DB_info: Database: AceView gene 5S275
        WormQTL gene WBGene00005496
        WormFlux gene WBGene00005496
        NDB locus_tag CELE_Y94A7B.1
        Panther gene CAEEL|WormBase=WBGene00005496|UniProtKB=Q9XXB2
          family PTHR22941
        NCBI gene 190790
        RefSeq protein NM_075093.2
        TrEMBL UniProtAcc Q9XXB2
        UniProt_GCRP UniProtAcc Q9XXB2
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:38 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srh
    Allele (61)
    RNASeq_FPKM (74)
    GO_annotation: 00104219
    Ortholog: WBGene00063793 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00063738 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00086254 Caenorhabditis remanei From_analysis: TreeFam
      CSP29.g12131 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP39.g24702 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      chrV_pilon.g17557 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (297)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y94A7B.1
    Corresponding_CDS_history: Y94A7B.1:wp104
    Corresponding_transcript: Y94A7B.1.1
  Experimental_info: RNAi_result: WBRNAi00058644 Inferred_automatically: RNAi_primary
      WBRNAi00021532 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012973
      Expr1162062
    Drives_construct: WBCnstr00034929
    Construct_product: WBCnstr00034929
    Microarray_results (14)
    Expression_cluster: WBPaper00040209:B.thuringiensis_upregulated_N2
      WBPaper00040560:hpl-2_embryo_downregulated
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
      WBPaper00061527:srj-21-srh-32
      WBPaper00030985:Enterococcus_faecalis_upregulated
      WBPaper00030985:Serratia_marcesens_downregulated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00046548:dafachronic-acid_downregulated
    Interaction (100)
  Map_info: Map: V Position: 13.2152 Error: 0.002196
    Positive: Positive_clone: Y94A7B Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026594
    WBPaper00033469
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene