WormBase Tree Display for Gene: WBGene00005436
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| WBGene00005436 | SMap | S_parent | Sequence | C35D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-228 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C35D6.1 | ||||||||
| Molecular_name | C35D6.1 | ||||||||
| C35D6.1.1 | |||||||||
| CE15681 | |||||||||
| Other_name | CELE_C35D6.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | srh-228 | ||||||||
| DB_info | Database | AceView | gene | 4R95 | |||||
| WormQTL | gene | WBGene00005436 | |||||||
| WormFlux | gene | WBGene00005436 | |||||||
| NDB | locus_tag | CELE_C35D6.1 | |||||||
| NCBI | gene | 183232 | |||||||
| RefSeq | protein | NM_070545.1 | |||||||
| TrEMBL | UniProtAcc | G5EBR2 | |||||||
| UniProt_GCRP | UniProtAcc | G5EBR2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Paralog (299) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including sir-2.1; csr-1; and mir-34 based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Serpentine type 7TM GPCR chemoreceptor Srh and 7TM GPCR, serpentine receptor class h (Srh). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C35D6.1 | |||||||
| Corresponding_transcript | C35D6.1.1 | ||||||||
| Associated_feature | WBsf998853 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00041995 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011667 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041994 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025674 | ||||||||
| Expr1146002 | |||||||||
| Drives_construct | WBCnstr00034971 | ||||||||
| Construct_product | WBCnstr00034971 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster | WBPaper00045050:csr-1(hypomorph)_upregulated | ||||||||
| WBPaper00045420:fertilization_downregulated_transcript | |||||||||
| WBPaper00050488:adult_vs_dauer_regulated_N2_20C | |||||||||
| WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C | |||||||||
| WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C | |||||||||
| WBPaper00062325:muscle_depleted_coding-RNA | |||||||||
| cgc4489_group_18 | |||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | |||||||||
| WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h | |||||||||
| Interaction (39) | |||||||||
| Map_info | Map | IV | Position | 15.0222 | Error | 0.000533 | |||
| Positive | Positive_clone | C35D6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026594 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
