WormBase Tree Display for Gene: WBGene00005427

WBGene00005427 SMap: S_parent: Sequence: Y113G7B
  Identity: Version: 1
    Name: CGC_name: srh-217 Person_evidence: WBPerson522
      Sequence_name: Y113G7B.2
      Molecular_name: Y113G7B.2
        Y113G7B.2.1
        CE23285
        Y113G7B.2.2
      Other_name: CELE_Y113G7B.2 Accession_evidence: NDB BX284605
      Public_name: srh-217
    DB_info: Database: AceView gene 5U656
        WormQTL gene WBGene00005427
        WormFlux gene WBGene00005427
        NDB locus_tag CELE_Y113G7B.2
        Panther gene CAEEL|WormBase=WBGene00005427|UniProtKB=Q9U2Y0
          family PTHR22941
        NCBI gene 190969
        RefSeq protein NM_075493.3
        TrEMBL UniProtAcc Q9U2Y0
        UniProt_GCRP UniProtAcc Q9U2Y0
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:38 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srh
    Allele (128)
    RNASeq_FPKM (74)
    GO_annotation: 00099720
    Contained_in_operon: CEOP5580
    Ortholog: WBGene00129957 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00150346 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00138807 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00056726 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00121246 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00128562 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00111586 Pristionchus pacificus From_analysis: Inparanoid_8
      CSP29.g12127 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g11242 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      chrV_pilon.g18040 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (297)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y113G7B.2
    Corresponding_transcript: Y113G7B.2.1
      Y113G7B.2.2
  Experimental_info: RNAi_result: WBRNAi00055401 Inferred_automatically: RNAi_primary
      WBRNAi00082661 Inferred_automatically: RNAi_primary
      WBRNAi00082476 Inferred_automatically: RNAi_primary
      WBRNAi00036589 Inferred_automatically: RNAi_primary
      WBRNAi00019896 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1029214
      Expr1158915
      Expr2016433
      Expr2034639
    Drives_construct: WBCnstr00034978
    Construct_product: WBCnstr00034978
    Microarray_results (15)
    Expression_cluster (46)
    Interaction: WBInteraction000141337
      WBInteraction000249018
      WBInteraction000361402
      WBInteraction000416232
  Map_info: Map: V Position: 24.8966 Error: 0.004114
    Positive: Positive_clone: Y113G7B Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene