WormBase Tree Display for Gene: WBGene00005385
expand all nodes | collapse all nodes | view schema
| WBGene00005385 | SMap | S_parent | Sequence | C49G7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-169 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C49G7.2 | ||||||||
| Molecular_name | C49G7.2 | ||||||||
| C49G7.2.1 | |||||||||
| CE08860 | |||||||||
| Other_name | CELE_C49G7.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-169 | ||||||||
| DB_info | Database | AceView | gene | 5E527 | |||||
| WormQTL | gene | WBGene00005385 | |||||||
| WormFlux | gene | WBGene00005385 | |||||||
| NDB | locus_tag | CELE_C49G7.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005385|UniProtKB=O16227 | |||||||
| family | PTHR22941 | ||||||||
| NCBI | gene | 191885 | |||||||
| RefSeq | protein | NM_071730.1 | |||||||
| TrEMBL | UniProtAcc | O16227 | |||||||
| UniProt_GCRP | UniProtAcc | O16227 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00027492 | ||||||||
| Ortholog (16) | |||||||||
| Paralog (297) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C49G7.2 | |||||||
| Corresponding_transcript | C49G7.2.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00042821 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012154 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018702 | ||||||||
| Expr1146802 | |||||||||
| Expr2016396 | |||||||||
| Expr2034608 | |||||||||
| Drives_construct | WBCnstr00035006 | ||||||||
| Construct_product | WBCnstr00035006 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (21) | |||||||||
| SAGE_tag | SAGE:caaatcccgaatcagga | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:caactagtgaacttttc | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:caactagtga | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction (33) | |||||||||
| Map_info | Map | V | Position | -6.82462 | Error | 0.028079 | |||
| Positive | Positive_clone | C49G7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
