WormBase Tree Display for Gene: WBGene00005327
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| WBGene00005327 | SMap | S_parent | Sequence | R08H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-108 | Person_evidence | WBPerson522 | |||||
| Sequence_name | R08H2.11 | ||||||||
| Molecular_name | R08H2.11 | ||||||||
| Other_name | CELE_R08H2.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-108 | ||||||||
| DB_info | Database | AceView | gene | 5P846 | |||||
| WormQTL | gene | WBGene00005327 | |||||||
| NDB | locus_tag | CELE_R08H2.11 | |||||||
| NCBI | gene | 13216937 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | srh | ||||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Paralog | WBGene00005330 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| Structured_description | Automated_description | Enriched in neurons based on microarray studies. Is affected by etr-1; lpd-3; and lin-52 based on RNA-seq studies. Is affected by Sirolimus and allantoin based on microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS_history | R08H2.11:wp104 | |||||||
| Corresponding_pseudogene | R08H2.11 | ||||||||
| Experimental_info | Microarray_results (11) | ||||||||
| Expression_cluster | WBPaper00061527:srj-42-srw-113 | ||||||||
| WBPaper00062325:muscle_depleted_noncoding-RNA | |||||||||
| WBPaper00064661:lpd-3(ok2138)_upregulated | |||||||||
| WBPaper00065149:lin-52(n771)_downregulated | |||||||||
| WBPaper00030839:Embryo_Pan_Neuronal | |||||||||
| WBPaper00048989:eat-2(ad465)_rapamycin_upregulated | |||||||||
| WBPaper00048989:N2_allantoin_upregulated | |||||||||
| Map_info | Map | V | Position | 7.91705 | Error | 0.001873 | |||
| Positive | Positive_clone | R08H2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026594 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
