WormBase Tree Display for Gene: WBGene00005309
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| WBGene00005309 | SMap | S_parent | Sequence | C44C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-88 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C44C3.9 | ||||||||
| Molecular_name | C44C3.9 | ||||||||
| C44C3.9.1 | |||||||||
| CE24849 | |||||||||
| Other_name | CELE_C44C3.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-88 | ||||||||
| DB_info | Database | AceView | gene | 5D436 | |||||
| WormQTL | gene | WBGene00005309 | |||||||
| WormFlux | gene | WBGene00005309 | |||||||
| NDB | locus_tag | CELE_C44C3.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005309|UniProtKB=Q8IFY2 | |||||||
| family | PTHR22941 | ||||||||
| NCBI | gene | 191877 | |||||||
| RefSeq | protein | NM_071406.1 | |||||||
| TrEMBL | UniProtAcc | Q8IFY2 | |||||||
| UniProt_GCRP | UniProtAcc | Q8IFY2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (48) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00084097 | ||||||||
| Ortholog (19) | |||||||||
| Paralog (298) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C44C3.9 | |||||||
| Corresponding_transcript | C44C3.9.1 | ||||||||
| Associated_feature | WBsf999560 | ||||||||
| WBsf1019336 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029803 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042468 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024476 | ||||||||
| Expr1146457 | |||||||||
| Expr2034720 | |||||||||
| Drives_construct | WBCnstr00035048 | ||||||||
| Construct_product | WBCnstr00035048 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (46) | |||||||||
| Interaction | WBInteraction000546932 | ||||||||
| Map_info | Map | V | Position | -12.805 | |||||
| Positive | Positive_clone | C44C3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | srh-88 was previously connected to C44C3.3 (now srw-138) [Robertson H personal communication] [030129 ck1] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
