WormBase Tree Display for Gene: WBGene00005254
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| WBGene00005254 | SMap | S_parent | Sequence | W06D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-31 | Person_evidence | WBPerson522 | |||||
| Sequence_name | W06D12.7 | ||||||||
| Molecular_name | W06D12.7 | ||||||||
| W06D12.7.1 | |||||||||
| CE25142 | |||||||||
| Other_name | CELE_W06D12.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-31 | ||||||||
| DB_info | Database | AceView | gene | 5S187 | |||||
| WormQTL | gene | WBGene00005254 | |||||||
| WormFlux | gene | WBGene00005254 | |||||||
| NDB | locus_tag | CELE_W06D12.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005254|UniProtKB=Q9U346 | |||||||
| family | PTHR47922 | ||||||||
| NCBI | gene | 189249 | |||||||
| RefSeq | protein | NM_075078.3 | |||||||
| TREEFAM | TREEFAM_ID | TF320416 | |||||||
| TrEMBL | UniProtAcc | Q9U346 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U346 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (116) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099945 | ||||||||
| Ortholog (12) | |||||||||
| Paralog (292) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W06D12.7 | |||||||
| Corresponding_transcript | W06D12.7.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00054883 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1020513 | ||||||||
| Expr1158427 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (13) | |||||||||
| SAGE_tag | SAGE:ttaagaaaca | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:tatattttat | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:atccaacttc | Strand | Antisense | |||||||
| SAGE:ttgaaaatgt | Strand | Antisense | |||||||
| Map_info | Map | V | Position | 13.0444 | Error | 0.006023 | |||
| Positive | Positive_clone | W06D12 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
