WormBase Tree Display for Gene: WBGene00005222
expand all nodes | collapse all nodes | view schema
| WBGene00005222 | SMap | S_parent | Sequence | T05C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srg-65 | Person_evidence | WBPerson42 | |||||
| Sequence_name | T05C3.8 | ||||||||
| Molecular_name | T05C3.8 | ||||||||
| T05C3.8.1 | |||||||||
| CE33306 | |||||||||
| Other_name | CELE_T05C3.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srg-65 | ||||||||
| DB_info | Database | AceView | gene | 5F956 | |||||
| WormQTL | gene | WBGene00005222 | |||||||
| WormFlux | gene | WBGene00005222 | |||||||
| NDB | locus_tag | CELE_T05C3.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005222|UniProtKB=Q86B40 | |||||||
| family | PTHR31114 | ||||||||
| NCBI | gene | 353476 | |||||||
| RefSeq | protein | NM_182424.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315301 | |||||||
| TrEMBL | UniProtAcc | Q86B40 | |||||||
| UniProt_GCRP | UniProtAcc | Q86B40 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srg | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00083085 | ||||||||
| 00083086 | |||||||||
| 00113742 | |||||||||
| 00113743 | |||||||||
| 00113744 | |||||||||
| Ortholog (12) | |||||||||
| Paralog (25) | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05C3.8 | |||||||
| Corresponding_transcript | T05C3.8.1 | ||||||||
| Associated_feature | WBsf1000020 | ||||||||
| WBsf1019650 | |||||||||
| Experimental_info | Expr_pattern | Expr1024095 | |||||||
| Expr1156128 | |||||||||
| Expr2016352 | |||||||||
| Expr2034576 | |||||||||
| Drives_construct | WBCnstr00035112 | ||||||||
| Construct_product | WBCnstr00035112 | ||||||||
| Microarray_results | 182354_at | ||||||||
| A_12_P112017 | |||||||||
| GPL14144_T05C3.8_713-772_0.922_1_A | |||||||||
| GPL19516_CGZ0033383 | |||||||||
| GPL21109_T05C3.8 | |||||||||
| GPL8304_CE_WBGene00005222_A | |||||||||
| GPL8673_T05C3_8P00058 | |||||||||
| GPL8673_T05C3_8P00597 | |||||||||
| GPL8673_T05C3_8P00773 | |||||||||
| Expression_cluster (31) | |||||||||
| Map_info | Map | V | Position | -1.84486 | Error | 0.006739 | |||
| Positive | Positive_clone | T05C3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
