WormBase Tree Display for Gene: WBGene00005194
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WBGene00005194 | SMap | S_parent | Sequence | K04C1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | srg-37 | Person_evidence | WBPerson42 | |||||
Sequence_name | K04C1.1 | ||||||||
Molecular_name | K04C1.1 | ||||||||
K04C1.1.1 | |||||||||
CE53414 | |||||||||
Other_name | CELE_K04C1.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | srg-37 | ||||||||
DB_info | Database | AceView | gene | XO852 | |||||
WormQTL | gene | WBGene00005194 | |||||||
WormFlux | gene | WBGene00005194 | |||||||
NDB | locus_tag | CELE_K04C1.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00005194|UniProtKB=G3MU03 | |||||||
family | PTHR31552 | ||||||||
NCBI | gene | 186978 | |||||||
RefSeq | protein | NM_001373569.1 | |||||||
TrEMBL | UniProtAcc | G3MU03 | |||||||
UniProt_GCRP | UniProtAcc | G3MU03 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srg | ||||||||
Allele (28) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00009018 | ||||||||
00009019 | |||||||||
00009020 | |||||||||
00113670 | |||||||||
00113671 | |||||||||
00113672 | |||||||||
Ortholog | WBGene00056955 | Caenorhabditis remanei | From_analysis | OMA | |||||
TreeFam | |||||||||
WBGene00066690 | Caenorhabditis remanei | From_analysis | OMA | ||||||
TreeFam | |||||||||
WBGene00090539 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
CSP26.g17231 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP31.g2299 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP40.g14656 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00703.g14583 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_02456 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_023095 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
WBGene00083851 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
Paralog (37) | |||||||||
Structured_description | Concise_description | srg-37 encodes a G-protein coupled receptor (GPCR) of the serpentine receptor class g (srg) which is involved in perception of ascarosides, which are the major small-molecule components of the dauer pheromone and regulate developmental diapause (dauer), olfactory learning, social behaviors and life-span; srg-37 functions redundantly with srg-36 in the perception of ascaroside C3 to regulate dauer development; srg-37 and srg-36 are localized to the sensory cilia of the ASI chemosensory neuron. | Curator_confirmed | WBPerson324 | |||||
Date_last_updated | 16 Sep 2013 00:00:00 | ||||||||
Automated_description | Predicted to enable transmembrane signaling receptor activity. Involved in dauer larval development. Predicted to be located in membrane. Expressed in ASIL and ASIR. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K04C1.1 | |||||||
Corresponding_CDS_history | K04C1.1:wp271 | ||||||||
K04C1.1a:wp252 | |||||||||
K04C1.1b:wp252 | |||||||||
Corresponding_transcript | K04C1.1.1 | ||||||||
Associated_feature | WBsf1024371 | ||||||||
Experimental_info | RNAi_result | WBRNAi00016580 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049882 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr9605 | ||||||||
Expr1022199 | |||||||||
Expr1153587 | |||||||||
Expr2034558 | |||||||||
Drives_construct | WBCnstr00014167 | ||||||||
WBCnstr00035133 | |||||||||
Construct_product | WBCnstr00014167 | ||||||||
WBCnstr00035133 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (36) | |||||||||
Interaction (85) | |||||||||
WBProcess | WBbiopr:00000025 | ||||||||
Map_info | Map | X | Position | 16.6701 | |||||
Positive | Positive_clone | K04C1 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |