WormBase Tree Display for Gene: WBGene00005187
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| WBGene00005187 | SMap | S_parent | Sequence | W02F12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srg-30 | Person_evidence | WBPerson42 | |||||
| Sequence_name | W02F12.7 | ||||||||
| Molecular_name | W02F12.7 | ||||||||
| W02F12.7.1 | |||||||||
| CE38112 | |||||||||
| Other_name | CELE_W02F12.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srg-30 | ||||||||
| DB_info | Database | AceView | gene | 5H196 | |||||
| WormQTL | gene | WBGene00005187 | |||||||
| WormFlux | gene | WBGene00005187 | |||||||
| NDB | locus_tag | CELE_W02F12.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005187|UniProtKB=O45150 | |||||||
| family | PTHR31627 | ||||||||
| NCBI | gene | 189125 | |||||||
| RefSeq | protein | NM_072301.5 | |||||||
| SwissProt | UniProtAcc | O45150 | |||||||
| TREEFAM | TREEFAM_ID | TF315299 | |||||||
| UniProt_GCRP | UniProtAcc | O45150 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srg | ||||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00033948 | ||||||||
| 00033949 | |||||||||
| 00113652 | |||||||||
| 00113653 | |||||||||
| 00113654 | |||||||||
| Ortholog (25) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in ASEL; ASER; and neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W02F12.7 | |||||||
| Corresponding_CDS_history | W02F12.7:wp88 | ||||||||
| W02F12.7:wp138 | |||||||||
| W02F12.7:wp240 | |||||||||
| Corresponding_transcript | W02F12.7.1 | ||||||||
| Associated_feature | WBsf1000341 | ||||||||
| WBsf1000342 | |||||||||
| WBsf1019845 | |||||||||
| WBsf1019846 | |||||||||
| WBsf1019847 | |||||||||
| WBsf233858 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019513 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054621 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7913 | ||||||||
| Expr1025671 | |||||||||
| Expr1158165 | |||||||||
| Expr2016328 | |||||||||
| Expr2034554 | |||||||||
| Drives_construct | WBCnstr00012988 | ||||||||
| WBCnstr00035138 | |||||||||
| Construct_product | WBCnstr00035138 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (33) | |||||||||
| Interaction (85) | |||||||||
| Map_info | Map | V | Position | 0.134807 | Error | 0.000133 | |||
| Positive | Positive_clone | W02F12 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00030829 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
