WormBase Tree Display for Gene: WBGene00005164
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| WBGene00005164 | SMap | S_parent | Sequence | C18F10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srg-6 | Person_evidence | WBPerson42 | |||||
| Sequence_name | T12A2.13 | ||||||||
| Molecular_name | T12A2.13 | ||||||||
| T12A2.13.1 | |||||||||
| CE07482 | |||||||||
| Other_name | CELE_T12A2.13 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | srg-6 | ||||||||
| DB_info | Database | AceView | gene | 3H352 | |||||
| WormQTL | gene | WBGene00005164 | |||||||
| NDB | locus_tag | CELE_T12A2.13 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005164|UniProtKB=P54128 | |||||||
| family | PTHR31627 | ||||||||
| NCBI | gene | 24104889 | |||||||
| RefSeq | protein | NM_001306704.1 | |||||||
| SwissProt | UniProtAcc | P54128 | |||||||
| TREEFAM | TREEFAM_ID | TF315299 | |||||||
| UniProt_GCRP | UniProtAcc | P54128 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srg | ||||||||
| Allele (28) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted serpentine receptor. In possible operon, srg-1 to srg-9. [Troemel et al. 1995; CX] | ||||||||
| Strain | WBStrain00055317 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00048173 | ||||||||
| 00048174 | |||||||||
| 00113589 | |||||||||
| 00113590 | |||||||||
| 00113591 | |||||||||
| Ortholog (18) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T12A2.13 | |||||||
| Corresponding_transcript | T12A2.13.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00018616 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053151 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035489 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005335 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053150 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023356 | ||||||||
| Expr1156749 | |||||||||
| Expr2016354 | |||||||||
| Expr2034578 | |||||||||
| Drives_construct | WBCnstr00035154 | ||||||||
| Construct_product | WBCnstr00035154 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (23) | |||||||||
| Map_info | Map | III | Position | -1.40667 | Error | 0.000109 | |||
| Positive | Positive_clone | T12A2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002314 | ||||||||
| WBPaper00015440 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
