WormBase Tree Display for Gene: WBGene00005069
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WBGene00005069 | SMap | S_parent | Sequence | C27D6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | srb-4 | Person_evidence | WBPerson42 | |||
Sequence_name | C27D6.7 | ||||||
Molecular_name | C27D6.7 | ||||||
Other_name | CELE_C27D6.7 | Accession_evidence | NDB | BX284602 | |||
Public_name | srb-4 | ||||||
DB_info | Database | AceView | gene | 2F452 | |||
WormQTL | gene | WBGene00005069 | |||||
NDB | locus_tag | CELE_C27D6.7 | |||||
NCBI | gene | 13184877 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0000336 | |||||
Gene_class | srb | ||||||
Allele (13) | |||||||
Legacy_information | [C.elegansII] NMK. Probable pseudogene; may encode predicted serpentine receptor. srb-1 to srb-5 possible operon. [Troemel et al. 1995; CX] | ||||||
Strain | WBStrain00001970 | ||||||
WBStrain00002417 | |||||||
RNASeq_FPKM (74) | |||||||
Paralog | WBGene00005067 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||
Structured_description | Automated_description | Is affected by hmg-4; let-418; and dcp-66 based on RNA-seq studies. Is affected by resveratrol and Sirolimus based on microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS_history | C27D6.7:wp140 | |||||
Corresponding_pseudogene | C27D6.7 | ||||||
Experimental_info | Expr_pattern | Chronogram1290 | |||||
Expr5358 | |||||||
Expr5359 | |||||||
Drives_construct | WBCnstr00002755 | ||||||
WBCnstr00004405 | |||||||
Microarray_results | SMD_C27D6.7 | ||||||
184060_at | |||||||
A_12_P110172 | |||||||
Aff_C27D6.7 | |||||||
GPL19516_CGZ0006263 | |||||||
GPL21109_C27D6.7 | |||||||
Expression_cluster | WBPaper00055013:hmg-4(RNAi)_downregulated | ||||||
WBPaper00061527:srj-42-srw-113 | |||||||
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated | |||||||
cgc4489_group_12 | |||||||
WBPaper00025141:N2_Expressed_Genes | |||||||
WBPaper00025141:unc-4::GFP_Expressed_Genes | |||||||
WBPaper00026929:Resveratrol_regulated_daf-16 | |||||||
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated | |||||||
Map_info | Map | II | Position | -1.96572 | Error | 0.002399 | |
Positive | Positive_clone | C27D6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00002314 | ||||||
WBPaper00015440 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |