WormBase Tree Display for Gene: WBGene00005069
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WBGene00005069 | SMap | S_parent | Sequence | C27D6 | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | ||||||||
Name | CGC_name | srb-4 | Person_evidence | WBPerson42 | ||||||
Sequence_name | C27D6.7 | |||||||||
Molecular_name | C27D6.7 | |||||||||
Other_name | CELE_C27D6.7 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | srb-4 | |||||||||
DB_info | Database | AceView | gene | 2F452 | ||||||
WormQTL | gene | WBGene00005069 | ||||||||
NDB | locus_tag | CELE_C27D6.7 | ||||||||
NCBI | gene | 13184877 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
2 | 28 Feb 2005 11:20:24 | WBPerson1867 | Event | Changed_class | CDS | Pseudogene | ||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0000336 | ||||||||
Gene_class | srb | |||||||||
Allele (13) | ||||||||||
Legacy_information | [C.elegansII] NMK. Probable pseudogene; may encode predicted serpentine receptor. srb-1 to srb-5 possible operon. [Troemel et al. 1995; CX] | |||||||||
Strain | WBStrain00001970 | |||||||||
WBStrain00002417 | ||||||||||
RNASeq_FPKM (74) | ||||||||||
Paralog | WBGene00005067 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
Structured_description | Automated_description | Is affected by hmg-4; let-418; and dcp-66 based on RNA-seq studies. Is affected by resveratrol and Sirolimus based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | |||||||||
WBPerson37462 | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS_history | C27D6.7:wp140 | ||||||||
Corresponding_pseudogene | C27D6.7 | |||||||||
Experimental_info | Expr_pattern | Chronogram1290 | ||||||||
Expr5358 | ||||||||||
Expr5359 | ||||||||||
Drives_construct | WBCnstr00002755 | |||||||||
WBCnstr00004405 | ||||||||||
Microarray_results | SMD_C27D6.7 | |||||||||
184060_at | ||||||||||
A_12_P110172 | ||||||||||
Aff_C27D6.7 | ||||||||||
GPL19516_CGZ0006263 | ||||||||||
GPL21109_C27D6.7 | ||||||||||
Expression_cluster (8) | ||||||||||
Map_info | Map | II | Position | -1.96572 | Error | 0.002399 | ||||
Positive | Positive_clone | C27D6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Pseudo_map_position | ||||||||||
Reference | WBPaper00002314 | |||||||||
WBPaper00015440 | ||||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |