WormBase Tree Display for Gene: WBGene00005054
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| WBGene00005054 | SMap | S_parent | Sequence | F18C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | sra-28 | Person_evidence | WBPerson42 | |||||
| Sequence_name | F18C5.6 | ||||||||
| Molecular_name | F18C5.6 | ||||||||
| F18C5.6.1 | |||||||||
| CE02655 | |||||||||
| Other_name | CELE_F18C5.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sra-28 | ||||||||
| DB_info | Database | AceView | gene | 2G858 | |||||
| WormQTL | gene | WBGene00005054 | |||||||
| WormFlux | gene | WBGene00005054 | |||||||
| NDB | locus_tag | CELE_F18C5.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005054|UniProtKB=Q19550 | |||||||
| family | PTHR31582 | ||||||||
| NCBI | gene | 184634 | |||||||
| RefSeq | protein | NM_062928.2 | |||||||
| SwissProt | UniProtAcc | Q19550 | |||||||
| TREEFAM | TREEFAM_ID | TF316946 | |||||||
| UniProt_GCRP | UniProtAcc | Q19550 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sra | ||||||||
| Allele (17) | |||||||||
| Strain | WBStrain00003150 | ||||||||
| WBStrain00033336 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00065134 | ||||||||
| 00065135 | |||||||||
| 00065136 | |||||||||
| 00113515 | |||||||||
| 00113516 | |||||||||
| 00113517 | |||||||||
| Ortholog (19) | |||||||||
| Paralog (31) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in ASIL; ASIR; PQR; and neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F18C5.6 | |||||||
| Corresponding_transcript | F18C5.6.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00013501 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044938 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5787 | ||||||||
| Expr14006 | |||||||||
| Expr1015141 | |||||||||
| Expr1148906 | |||||||||
| Expr2016141 | |||||||||
| Expr2034376 | |||||||||
| Drives_construct | WBCnstr00003628 | ||||||||
| WBCnstr00035236 | |||||||||
| Construct_product | WBCnstr00035236 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (18) | |||||||||
| Interaction | WBInteraction000202233 | ||||||||
| WBInteraction000261329 | |||||||||
| WBInteraction000328943 | |||||||||
| WBInteraction000377302 | |||||||||
| WBInteraction000403384 | |||||||||
| WBInteraction000457055 | |||||||||
| Map_info | Map | II | Position | -0.122809 | Error | 0.000813 | |||
| Positive | Positive_clone | F18C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024667 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
