WormBase Tree Display for Gene: WBGene00005041
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| WBGene00005041 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | AH6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sra-15 | Person_evidence | WBPerson42 | |||||
| Sequence_name | AH6.16 | ||||||||
| Molecular_name | AH6.16 | ||||||||
| Other_name | CELE_AH6.16 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sra-15 | ||||||||
| DB_info | Database | AceView | gene | 2J817 | |||||
| NDB | locus_tag | CELE_AH6.16 | |||||||
| NCBI | gene | 13186509 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | sra | ||||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Paralog | WBGene00005028 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| Structured_description | Automated_description | Enriched in AVK based on RNA-seq studies. Is affected by several genes including pgl-1; glh-1; and pgl-3 based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_pseudogene | AH6.16 | |||||||
| Experimental_info | Microarray_results | 188093_at | |||||||
| A_12_P144855 | |||||||||
| A_12_P144856 | |||||||||
| A_12_P144857 | |||||||||
| GPL19516_CGZ0000146 | |||||||||
| GPL19516_CGZ0000152 | |||||||||
| GPL21109_AH6.16 | |||||||||
| GPL21109_AH6.6 | |||||||||
| Expression_cluster | WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult | ||||||||
| WBPaper00055013:spt-16(RNAi)_upregulated | |||||||||
| WBPaper00055565:AVK_enriched | |||||||||
| WBPaper00064661:lpd-3(ok2138)_upregulated | |||||||||
| Map_info | Map | II | Position | 1.50494 | Error | 0.002665 | |||
| Positive | Positive_clone | AH6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024667 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
