WormBase Tree Display for Gene: WBGene00005034
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| WBGene00005034 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | AH6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sra-8 | Person_evidence | WBPerson42 | |||||
| Sequence_name | AH6.12 | ||||||||
| Molecular_name | AH6.12 | ||||||||
| AH6.12.1 | |||||||||
| CE01453 | |||||||||
| Other_name | CELE_AH6.12 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sra-8 | ||||||||
| DB_info | Database | AceView | gene | 2J827 | |||||
| WormQTL | gene | WBGene00005034 | |||||||
| WormFlux | gene | WBGene00005034 | |||||||
| NDB | locus_tag | CELE_AH6.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005034|UniProtKB=Q09210 | |||||||
| family | PTHR31357 | ||||||||
| NCBI | gene | 191779 | |||||||
| RefSeq | protein | NM_063646.4 | |||||||
| SwissProt | UniProtAcc | Q09210 | |||||||
| TREEFAM | TREEFAM_ID | TF316946 | |||||||
| UniProt_GCRP | UniProtAcc | Q09210 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sra | ||||||||
| Allele (22) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted serpentine receptor. sra-1 to sra-9 clustered. [Troemel et al. 1995; CX] | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00052890 | ||||||||
| 00052891 | |||||||||
| 00052892 | |||||||||
| 00052893 | |||||||||
| 00052894 | |||||||||
| 00052895 | |||||||||
| 00113464 | |||||||||
| 00113465 | |||||||||
| 00113466 | |||||||||
| Ortholog (37) | |||||||||
| Paralog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | AH6.12 | |||||||
| Corresponding_transcript | AH6.12.1 | ||||||||
| Associated_feature | WBsf221895 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00009528 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038618 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019261 | ||||||||
| Expr1142825 | |||||||||
| Drives_construct | WBCnstr00035252 | ||||||||
| Construct_product | WBCnstr00035252 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster | WBPaper00032528:L3_depleted | ||||||||
| WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray | |||||||||
| WBPaper00045420:fertilization_downregulated_transcript | |||||||||
| WBPaper00061527:srj-21-srh-32 | |||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | |||||||||
| WBPaper00036123:Cadmium_regulated | |||||||||
| WBPaper00040210:Diazinon_24C_regulated | |||||||||
| WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_48h | |||||||||
| [cgc5767]:expression_class_M | |||||||||
| [cgc5767]:expression_class_SM | |||||||||
| Interaction (202) | |||||||||
| Map_info | Map | II | Position | 1.52573 | Error | 0.002813 | |||
| Positive | Positive_clone | AH6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002314 | ||||||||
| WBPaper00005965 | |||||||||
| WBPaper00015440 | |||||||||
| WBPaper00024667 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
