WormBase Tree Display for Gene: WBGene00005012
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WBGene00005012 | SMap | S_parent | Sequence | F26F4 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele | WBVar01999572 | |||||
WBVar01566377 | ||||||
WBVar00824593 | ||||||
WBVar00824594 | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (32) | ||||||
Paralog | WBGene00009501 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Inparanoid_8 | ||||||
WormBase-Compara | ||||||
Structured_description | Concise_description | F26F4.2 encodes a novel protein with high similarity to C. elegans F37A8.1 and C. briggsae CBG18186. | Curator_confirmed | WBPerson48 | ||
Date_last_updated | 17 Jul 2007 00:00:00 | |||||
Automated_description | Enriched in RIC; germ line; intestine; sperm; and in male based on proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; dpy-10; and rrf-3 based on microarray; proteomic; and RNA-seq studies. Is affected by fifteen chemicals including methylmercuric chloride; allantoin; and Sirolimus based on microarray; RNA-seq; and proteomic studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed (2) | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F26F4.2 | ||||
Corresponding_transcript | F26F4.2.1 | |||||
Other_sequence | CJC05297_1 | |||||
Associated_feature | WBsf224825 | |||||
Experimental_info | RNAi_result | WBRNAi00045674 | Inferred_automatically | RNAi_primary | ||
WBRNAi00013962 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00005116 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00045671 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1019910 | |||||
Expr1032496 | ||||||
Expr1149586 | ||||||
Expr2003035 | ||||||
Expr2021249 | ||||||
Drives_construct | WBCnstr00035268 | |||||
Construct_product | WBCnstr00035268 | |||||
Microarray_results (19) | ||||||
Expression_cluster (137) | ||||||
Interaction (40) | ||||||
Map_info | Positive | Positive_clone | F26F4 | Inferred_automatically | From CDS info | |
From sequence, transcript, pseudogene data | ||||||
Interpolated_map_position | III | -2.38345 | ||||
Remark | This gene was previously incorrectly identified as spt-1 based on an unintended error in the CGC strain data files | Curator_confirmed | WBPerson1971 | |||
Method | Gene |