WormBase Tree Display for Gene: WBGene00005003
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WBGene00005003 | Evidence | Author_evidence | Patthy L | ||||
---|---|---|---|---|---|---|---|
Hodgkin JA | |||||||
SMap | S_parent | Sequence | F27C8 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | spp | ||||||
Allele (13) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00066022 | ||||||
Ortholog (22) | |||||||
Structured_description | Automated_description | Involved in innate immune response. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed (2) | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F27C8.4a | |||||
F27C8.4b | |||||||
Corresponding_transcript | F27C8.4a.1 | ||||||
F27C8.4b.1 | |||||||
Other_sequence | CSC00706_1 | ||||||
Acan_isotig15926 | |||||||
FD517186.1 | |||||||
CBC01973_1 | |||||||
FD514900.1 | |||||||
FD516627.1 | |||||||
Oden_isotig24770 | |||||||
CBC01973_2 | |||||||
CJC02180_1 | |||||||
Associated_feature | WBsf646242 | ||||||
WBsf228846 | |||||||
WBsf228847 | |||||||
Experimental_info | RNAi_result (5) | ||||||
Expr_pattern | Expr1013487 | ||||||
Expr1032489 | |||||||
Expr1149642 | |||||||
Expr2016073 | |||||||
Expr2034309 | |||||||
Drives_construct | WBCnstr00035276 | ||||||
Construct_product | WBCnstr00035276 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (292) | |||||||
Interaction (48) | |||||||
Map_info | Map | IV | Position | 4.32629 | Error | 0.001722 | |
Positive | Positive_clone | F27C8 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00006465 | ||||||
WBPaper00024209 | |||||||
WBPaper00027295 | |||||||
WBPaper00028482 | |||||||
WBPaper00061383 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |