WormBase Tree Display for Gene: WBGene00004894
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| WBGene00004894 | Evidence | Paper_evidence | WBPaper00024174 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y22D7AL | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sms-3 | |||||||
| Sequence_name | Y22D7AL.8 | ||||||||
| Molecular_name (19) | |||||||||
| Other_name | CELE_Y22D7AL.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | sms-3 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sms | ||||||||
| Allele (608) | |||||||||
| Strain | WBStrain00033224 | ||||||||
| In_cluster | conserved_miRNA_siRNA_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00004892 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004893 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018735 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021075 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable ceramide cholinephosphotransferase activity and sphingomyelin synthase activity. Predicted to be involved in ceramide biosynthetic process and sphingomyelin biosynthetic process. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y22D7AL.8a | |||||||
| Y22D7AL.8b | |||||||||
| Y22D7AL.8c | |||||||||
| Y22D7AL.8d | |||||||||
| Y22D7AL.8e | |||||||||
| Corresponding_transcript | Y22D7AL.8a.1 | ||||||||
| Y22D7AL.8a.2 | |||||||||
| Y22D7AL.8a.3 | |||||||||
| Y22D7AL.8a.4 | |||||||||
| Y22D7AL.8a.5 | |||||||||
| Y22D7AL.8b.1 | |||||||||
| Y22D7AL.8c.1 | |||||||||
| Y22D7AL.8d.1 | |||||||||
| Y22D7AL.8e.1 | |||||||||
| Other_sequence (37) | |||||||||
| Associated_feature | WBsf650855 | ||||||||
| WBsf991331 | |||||||||
| WBsf1014261 | |||||||||
| WBsf226230 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00002138 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055673 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011030 | ||||||||
| Expr1032433 | |||||||||
| Expr1159199 | |||||||||
| Expr2015928 | |||||||||
| Expr2034161 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction | WBInteraction000505202 | ||||||||
| Map_info | Map | III | Position | -20.5459 | Error | 0.277675 | |||
| Positive | Positive_clone | Y22D7AL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024174 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039359 | |||||||||
| WBPaper00040560 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00042609 | |||||||||
| WBPaper00051753 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059258 | |||||||||
| Picture | WBPicture0000013061 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
