WormBase Tree Display for Gene: WBGene00004826
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WBGene00004826 | Evidence | CGC_data_submission | ||||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | R12H7 | |||
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | skr | |||||
Allele (13) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00015684 | |||||
00015685 | ||||||
00015686 | ||||||
00015687 | ||||||
00015688 | ||||||
00015689 | ||||||
00015690 | ||||||
00113232 | ||||||
Contained_in_operon | CEOPX116 | |||||
Ortholog (77) | ||||||
Paralog (20) | ||||||
Structured_description | Concise_description | The skr-20 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-20(RNAi) animals are at least superficially normal. | Paper_evidence | WBPaper00005128 | ||
WBPaper00005129 | ||||||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | R12H7.5 | ||||
Corresponding_transcript | R12H7.5.1 | |||||
Other_sequence | AF440519 | |||||
CBC00224_1 | ||||||
Associated_feature | WBsf671189 | |||||
WBsf238106 | ||||||
Experimental_info | RNAi_result | WBRNAi00086808 | Inferred_automatically | RNAi_primary | ||
WBRNAi00034902 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00051867 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00086799 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00098058 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00017802 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00094813 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00086807 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00098133 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1011467 | |||||
Expr1032401 | ||||||
Expr1155526 | ||||||
Expr2015848 | ||||||
Expr2034081 | ||||||
Drives_construct | WBCnstr00035360 | |||||
Construct_product | WBCnstr00035360 | |||||
Microarray_results (18) | ||||||
Expression_cluster (130) | ||||||
Interaction (13) | ||||||
Map_info | Map | X | Position | 10.3998 | ||
Positive | Positive_clone | R12H7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00029151 | |||||
WBPaper00029221 | ||||||
WBPaper00055090 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |