WormBase Tree Display for Gene: WBGene00004822
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WBGene00004822 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C42D4 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | skr-16 | Person_evidence | WBPerson322 | |||||
Sequence_name | C42D4.6 | ||||||||
Molecular_name | C42D4.6 | ||||||||
C42D4.6.1 | |||||||||
CE37712 | |||||||||
Other_name | CELE_C42D4.6 | Accession_evidence | NDB | BX284604 | |||||
Public_name | skr-16 | ||||||||
DB_info | Database | AceView | gene | 4H931 | |||||
WormQTL | gene | WBGene00004822 | |||||||
WormFlux | gene | WBGene00004822 | |||||||
NDB | locus_tag | CELE_C42D4.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004822|UniProtKB=Q18567 | |||||||
family | PTHR11165 | ||||||||
NCBI | gene | 191765 | |||||||
RefSeq | protein | NM_068727.7 | |||||||
TREEFAM | TREEFAM_ID | TF300142 | |||||||
TrEMBL | UniProtAcc | Q18567 | |||||||
UniProt_GCRP | UniProtAcc | Q18567 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | skr | ||||||||
Allele (11) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00061674 | ||||||||
00061675 | |||||||||
00061676 | |||||||||
00061677 | |||||||||
00061678 | |||||||||
00113228 | |||||||||
Ortholog (75) | |||||||||
Paralog (20) | |||||||||
Structured_description | Concise_description | The skr-16 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-16(RNAi) animals are at least superficially normal. | Paper_evidence | WBPaper00005128 | |||||
WBPaper00005129 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (5) | |||||||||
Experimental_info | RNAi_result | WBRNAi00086795 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042358 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00069094 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00094690 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018259 | ||||||||
Expr1032397 | |||||||||
Expr1146345 | |||||||||
Expr2015843 | |||||||||
Expr2034076 | |||||||||
Drives_construct | WBCnstr00035362 | ||||||||
Construct_product | WBCnstr00035362 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (103) | |||||||||
Interaction (20) | |||||||||
Map_info (3) | |||||||||
Reference | WBPaper00055090 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |