WormBase Tree Display for Gene: WBGene00004822
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WBGene00004822 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C42D4 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | skr | ||||||
Allele (11) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00061674 | ||||||
00061675 | |||||||
00061676 | |||||||
00061677 | |||||||
00061678 | |||||||
00113228 | |||||||
Ortholog (75) | |||||||
Paralog (20) | |||||||
Structured_description | Concise_description | The skr-16 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-16(RNAi) animals are at least superficially normal. | Paper_evidence | WBPaper00005128 | |||
WBPaper00005129 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C42D4.6 | |||||
Corresponding_CDS_history | C42D4.6:wp134 | ||||||
Corresponding_transcript | C42D4.6.1 | ||||||
Other_sequence | CBC00716_1 | ||||||
Associated_feature | WBsf646067 | ||||||
WBsf228510 | |||||||
Experimental_info | RNAi_result | WBRNAi00086795 | Inferred_automatically | RNAi_primary | |||
WBRNAi00042358 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00069094 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00094690 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1018259 | ||||||
Expr1032397 | |||||||
Expr1146345 | |||||||
Expr2015843 | |||||||
Expr2034076 | |||||||
Drives_construct | WBCnstr00035362 | ||||||
Construct_product | WBCnstr00035362 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (103) | |||||||
Interaction (20) | |||||||
Map_info | Map | IV | Position | 3.29126 | Error | 5.7e-05 | |
Positive | Positive_clone | C42D4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00055090 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |