WormBase Tree Display for Gene: WBGene00004812

WBGene00004812 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: Y37H2C
  Identity: Version: 1
    Name: CGC_name: skr-6 Person_evidence: WBPerson322
      Sequence_name: Y37H2C.2
      Molecular_name: Y37H2C.2
        Y37H2C.2.1
        CE42424
      Other_name: CELE_Y37H2C.2 Accession_evidence: NDB BX284605
      Public_name: skr-6
    DB_info: Database: AceView gene 5S754
        WormQTL gene WBGene00004812
        WormFlux gene WBGene00004812
        NDB locus_tag CELE_Y37H2C.2
        Panther gene CAEEL|WormBase=WBGene00004812|UniProtKB=Q9U2N1
          family PTHR11165
        NCBI gene 191763
        RefSeq protein NM_075173.2
        TREEFAM TREEFAM_ID TF354233
        TrEMBL UniProtAcc Q9U2N1
        UniProt_GCRP UniProtAcc Q9U2N1
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: skr
    Allele (28)
    RNASeq_FPKM (74)
    GO_annotation: 00099463
      00099464
      00099465
      00099466
      00113219
    Ortholog (64)
    Paralog (20)
    Structured_description: Concise_description: The skr-6 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-6(RNAi) animals are at least superficially normal. Paper_evidence: WBPaper00005128
            WBPaper00005129
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y37H2C.2
    Corresponding_CDS_history: Y37H2C.2:wp188
    Corresponding_transcript: Y37H2C.2.1
  Experimental_info: RNAi_result: WBRNAi00098122 Inferred_automatically: RNAi_primary
      WBRNAi00094695 Inferred_automatically: RNAi_primary
      WBRNAi00086785 Inferred_automatically: RNAi_primary
      WBRNAi00055961 Inferred_automatically: RNAi_primary
      WBRNAi00086802 Inferred_automatically: RNAi_primary
      WBRNAi00020242 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017617
      Expr1159480
    Drives_construct: WBCnstr00035371
    Construct_product: WBCnstr00035371
    Microarray_results (14)
    Expression_cluster (14)
    Interaction: WBInteraction000160161
      WBInteraction000223387
      WBInteraction000238946
      WBInteraction000294752
      WBInteraction000349344
      WBInteraction000427334
  Map_info: Map: V Position: 14.944 Error: 0.03969
    Positive: Positive_clone: Y37H2C Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028374
    WBPaper00029151
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene