WormBase Tree Display for Gene: WBGene00004481
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WBGene00004481 | SMap | S_parent | Sequence | F54E7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | rps-12 | |||||||
Sequence_name | F54E7.2 | ||||||||
Molecular_name | F54E7.2 | ||||||||
F54E7.2.1 | |||||||||
CE26896 | |||||||||
F54E7.2.2 | |||||||||
F54E7.2.3 | |||||||||
F54E7.2.4 | |||||||||
Other_name | CELE_F54E7.2 | Accession_evidence | NDB | BX284603 | |||||
Public_name | rps-12 | ||||||||
DB_info | Database | AceView | gene | 3G769 | |||||
WormQTL | gene | WBGene00004481 | |||||||
WormFlux | gene | WBGene00004481 | |||||||
NDB | locus_tag | CELE_F54E7.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004481|UniProtKB=P49196 | |||||||
family | PTHR11843 | ||||||||
NCBI | gene | 175786 | |||||||
RefSeq | protein | NM_065820.8 | |||||||
SwissProt | UniProtAcc | P49196 | |||||||
TREEFAM | TREEFAM_ID | TF300196 | |||||||
UniProt_GCRP | UniProtAcc | P49196 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | rps | ||||||||
Allele (21) | |||||||||
Legacy_information | Orthologous to yeast (S.cerevisiae) ribosomal protein rps12 using blastP | ||||||||
RNASeq_FPKM (72) | |||||||||
GO_annotation (11) | |||||||||
Contained_in_operon | CEOP3316 | ||||||||
Ortholog (39) | |||||||||
Structured_description (2) | |||||||||
Molecular_info | Corresponding_CDS | F54E7.2 | |||||||
Corresponding_transcript | F54E7.2.1 | ||||||||
F54E7.2.2 | |||||||||
F54E7.2.3 | |||||||||
F54E7.2.4 | |||||||||
Other_sequence (261) | |||||||||
Associated_feature | WBsf645194 | ||||||||
WBsf645195 | |||||||||
WBsf658981 | |||||||||
WBsf981484 | |||||||||
WBsf1014935 | |||||||||
WBsf224977 | |||||||||
Experimental_info | RNAi_result (21) | ||||||||
Expr_pattern (5) | |||||||||
Drives_construct | WBCnstr00035452 | ||||||||
Construct_product | WBCnstr00035452 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (178) | |||||||||
Interaction (178) | |||||||||
Map_info | Map | III | Position | -1.45858 | Error | 0.000827 | |||
Positive | Positive_clone | F54E7 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00024230 | ||||||||
WBPaper00028564 | |||||||||
WBPaper00029197 | |||||||||
WBPaper00038356 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00049828 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00065012 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |