WormBase Tree Display for Gene: WBGene00004460
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WBGene00004460 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C30C11 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rpn | ||||||
Allele (21) | |||||||
Strain | WBStrain00001197 | ||||||
WBStrain00047450 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00052645 | ||||||
00052646 | |||||||
00052647 | |||||||
00052648 | |||||||
00052649 | |||||||
00052650 | |||||||
00112935 | |||||||
00112936 | |||||||
00112937 | |||||||
Contained_in_operon | CEOP3528 | ||||||
Ortholog (35) | |||||||
Paralog (2) | |||||||
Structured_description | Automated_description | Predicted to enable enzyme regulator activity. Involved in programmed cell death involved in cell development. Predicted to be part of proteasome regulatory particle, lid subcomplex. Expressed in head; intestine; and tail. Is an ortholog of human PSMD3 (proteasome 26S subunit, non-ATPase 3). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C30C11.2 | |||||
Corresponding_transcript | C30C11.2.1 | ||||||
Other_sequence (100) | |||||||
Associated_feature | WBsf645418 | ||||||
WBsf645419 | |||||||
WBsf659288 | |||||||
WBsf225418 | |||||||
WBsf225419 | |||||||
WBsf225420 | |||||||
WBsf225421 | |||||||
Experimental_info | RNAi_result (22) | ||||||
Expr_pattern | Chronogram1395 | ||||||
Chronogram1679 | |||||||
Expr5382 | |||||||
Expr1013089 | |||||||
Expr1032263 | |||||||
Expr1145554 | |||||||
Expr2015491 | |||||||
Expr2033726 | |||||||
Drives_construct | WBCnstr00002090 | ||||||
WBCnstr00035468 | |||||||
Construct_product | WBCnstr00035468 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (163) | |||||||
Interaction (162) | |||||||
Map_info | Map | III | Position | -0.259374 | Error | 0.000552 | |
Positive | Positive_clone | C30C11 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference (14) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |