WormBase Tree Display for Gene: WBGene00004456
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| WBGene00004456 | SMap | S_parent | Sequence | Y48B6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rpl-43 | |||||||
| Sequence_name | Y48B6A.2 | ||||||||
| Molecular_name | Y48B6A.2 | ||||||||
| Y48B6A.2.1 | |||||||||
| CE22117 | |||||||||
| Other_name | CELE_Y48B6A.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | rpl-43 | ||||||||
| DB_info | Database | AceView | gene | 2O445 | |||||
| WormQTL | gene | WBGene00004456 | |||||||
| WormFlux | gene | WBGene00004456 | |||||||
| NDB | locus_tag | CELE_Y48B6A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004456|UniProtKB=Q9U2A8 | |||||||
| family | PTHR48160 | ||||||||
| NCBI | gene | 175070 | |||||||
| RefSeq | protein | NM_064556.7 | |||||||
| SwissProt | UniProtAcc | Q9U2A8 | |||||||
| TREEFAM | TREEFAM_ID | TF313068 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U2A8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rpl | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar00787168 | |||||||||
| WBVar00787169 | |||||||||
| WBVar00787170 | |||||||||
| WBVar01498435 | |||||||||
| WBVar00384531 | |||||||||
| WBVar02125760 | |||||||||
| WBVar01721525 | |||||||||
| WBVar01498941 | |||||||||
| Legacy_information | Orthologous to yeast (S.cerevisiae) ribosomal protein rpl43 using blastP | ||||||||
| Strain | WBStrain00008594 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00098976 | ||||||||
| 00098977 | |||||||||
| 00098978 | |||||||||
| 00098979 | |||||||||
| 00098980 | |||||||||
| 00112925 | |||||||||
| 00112926 | |||||||||
| 00112927 | |||||||||
| Contained_in_operon | CEOP2697 | ||||||||
| Ortholog (41) | |||||||||
| Structured_description (2) | |||||||||
| Molecular_info | Corresponding_CDS | Y48B6A.2 | |||||||
| Corresponding_transcript | Y48B6A.2.1 | ||||||||
| Other_sequence (302) | |||||||||
| Associated_feature | WBsf644831 | ||||||||
| WBsf654850 | |||||||||
| WBsf658390 | |||||||||
| WBsf222425 | |||||||||
| WBsf222426 | |||||||||
| WBsf222427 | |||||||||
| Experimental_info | RNAi_result (5) | ||||||||
| Expr_pattern | Expr1017921 | ||||||||
| Expr1032259 | |||||||||
| Expr1160332 | |||||||||
| Expr2015477 | |||||||||
| Expr2033712 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction (174) | |||||||||
| Map_info | Map | II | Position | 22.4552 | Error | 0.003479 | |||
| Positive | Positive_clone | Y48B6A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025088 | ||||||||
| WBPaper00028564 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00045184 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
