WormBase Tree Display for Gene: WBGene00004454

WBGene00004454 SMap: S_parent: Sequence: C09H10
  Identity: Version: 4
    Name: CGC_name: rpl-36A Person_evidence: WBPerson555
      Sequence_name: C09H10.2
      Molecular_name: C09H10.2
        C09H10.2.1
        CE02131
        C09H10.2.2
      Other_name: 2L388 Accession_evidence: EMBL AF304121
        rpl-41
        rpl-36.A Person_evidence: WBPerson555
        eL42 Person_evidence: WBPerson555
        CELE_C09H10.2 Accession_evidence: NDB BX284602
      Public_name: rpl-36A
    DB_info: Database (10)
    Species: Caenorhabditis elegans
    History: Version_change (4)
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpl
    Allele: WBVar01499702
      WBVar01477991
      WBVar01498435
      WBVar01499235
      WBVar00766792
      WBVar01499606
      WBVar02130695
      WBVar01498940
      WBVar00377688
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rpl41 using blastP
    RNASeq_FPKM (74)
    GO_annotation: 00044467
      00044468
      00044469
      00044470
      00107694
      00107695
      00107696
    Contained_in_operon: CEOP2717
    Ortholog (43)
    Structured_description: Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of human RPL36A (ribosomal protein L36a) and RPL36AL (ribosomal protein L36a like). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: C09H10.2
    Corresponding_transcript (2)
    Other_sequence (377)
    Associated_feature: WBsf989622
      WBsf223889
      WBsf223890
  Experimental_info: RNAi_result (40)
    Expr_pattern: Expr1021731
      Expr1032258
      Expr1144323
      Expr2015468
      Expr2033703
    Drives_construct: WBCnstr00037925
    Construct_product: WBCnstr00037925
    Microarray_results (18)
    Expression_cluster (158)
    Interaction (153)
  Map_info: Map: II Position: 3.21535 Error: 0.010685
    Positive: Positive_clone: C09H10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00065351
  Remark: rpl-41 is described as Orthologous to yeast (S.cerevisiae) ribosomal protein rpl41 using blastP"; BlastP with S. cerevisiae Mak18p (gb|AAB68420) gives one hit in the genome with E < 0.01, C09H10.2 Person_evidence: WBPerson567
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    Approved Human ortholog symbol: RPL36A Person_evidence: WBPerson555
    New system for naming ribosomal proteins name: eL42 Paper_evidence: WBPaper00066708
    Standard Protein name: RPL-36A Person_evidence: WBPerson555
  Method: Gene