WormBase Tree Display for Gene: WBGene00004439
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WBGene00004439 | SMap | S_parent | Sequence | F52B5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 1I906 | |||||
WormQTL | gene | WBGene00004439 | |||||||
WormFlux | gene | WBGene00004439 | |||||||
NDB | locus_tag | CELE_F52B5.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004439|UniProtKB=Q20647 | |||||||
family | PTHR11620 | ||||||||
NCBI | gene | 172617 | |||||||
RefSeq | protein | NM_001383465.2 | |||||||
SwissProt | UniProtAcc | Q20647 | |||||||
TREEFAM | TREEFAM_ID | TF314116 | |||||||
UniProt_GCRP | UniProtAcc | Q20647 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | rpl | ||||||||
Allele (15) | |||||||||
Legacy_information | Orthologous to yeast (S.cerevisiae) ribosomal protein rpl25 using blastP | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (27) | |||||||||
Paralog | WBGene00004438 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description (2) | |||||||||
Molecular_info | Corresponding_CDS | F52B5.6 | |||||||
Corresponding_transcript | F52B5.6.1 | ||||||||
F52B5.6.2 | |||||||||
F52B5.6.3 | |||||||||
F52B5.6.4 | |||||||||
Other_sequence (119) | |||||||||
Associated_feature | WBsf649383 | ||||||||
WBsf655290 | |||||||||
WBsf663815 | |||||||||
WBsf984407 | |||||||||
WBsf984408 | |||||||||
WBsf219904 | |||||||||
Experimental_info | RNAi_result (17) | ||||||||
Expr_pattern | Expr1025098 | ||||||||
Expr1032243 | |||||||||
Expr1151753 | |||||||||
Expr2015456 | |||||||||
Expr2033691 | |||||||||
Drives_construct | WBCnstr00035485 | ||||||||
Construct_product | WBCnstr00035485 | ||||||||
Antibody | WBAntibody00002469 | ||||||||
WBAntibody00002841 | |||||||||
Microarray_results (26) | |||||||||
Expression_cluster (155) | |||||||||
Interaction (272) | |||||||||
Map_info | Map | I | Position | 2.74086 | Error | 0.002136 | |||
Positive | Positive_clone | F52B5 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00004402 | ||||||||
WBPaper00024924 | |||||||||
WBPaper00026593 | |||||||||
WBPaper00028381 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00049828 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00062604 | |||||||||
WBPaper00064339 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |