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WormBase Tree Display for Gene: WBGene00004358

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Name Class

WBGene00004358SMapS_parentSequenceF08F3
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classrhr
Allele (35)
Legacy_information[Nettell J] rhr for Rh blood group antigen related. No mutants known. Predicted gene F08F3.3
StrainWBStrain00003312
WBStrain00030768
RNASeq_FPKM (74)
GO_annotation (11)
Ortholog (52)
ParalogWBGene00000133Caenorhabditis elegansFrom_analysisPanther
WBGene00000134Caenorhabditis elegansFrom_analysisPanther
WBGene00000135Caenorhabditis elegansFrom_analysisPanther
WBGene00000136Caenorhabditis elegansFrom_analysisPanther
WBGene00004359Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionrhr-1 encodes an ortholog of human Rhesus blood-group associated glycoprotein (RHAG; OMIM:180297, mutated in chronic hemolytic anemia), a member of the ammonium transporter family, and affects general levels of mRNA transcripts, and embryonic viability in a large-scale RNAi screen.Paper_evidenceWBPaper00004651
WBPaper00019491
Curator_confirmedWBPerson48
WBPerson1823
WBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnables ammonium transmembrane transporter activity. Involved in ammonium transmembrane transport. Predicted to be located in plasma membrane. Expressed in head. Human ortholog(s) of this gene implicated in Rh deficiency syndrome; Rh isoimmunization; and overhydrated hereditary stomatocytosis. Is an ortholog of human RHAG (Rh associated glycoprotein); RHBG (Rh family B glycoprotein); and RHCG (Rh family C glycoprotein).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050641Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10006)
DOID:4175Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10009)
DOID:0111562Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10006)
DOID:583Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10006)
Molecular_infoCorresponding_CDSF08F3.3
Corresponding_transcriptF08F3.3.1
Other_sequence (59)
Associated_featureWBsf231758
WBsf231759
Experimental_infoRNAi_resultWBRNAi00030654Inferred_automaticallyRNAi_primary
WBRNAi00077594Inferred_automaticallyRNAi_primary
WBRNAi00002398Inferred_automaticallyRNAi_primary
WBRNAi00044017Inferred_automaticallyRNAi_primary
Expr_pattern (9)
Drives_constructWBCnstr00002746
WBCnstr00003783
WBCnstr00035541
Construct_productWBCnstr00035541
Microarray_results (22)
Expression_cluster (237)
Interaction (35)
Map_infoMapVPosition-2.02048Error0.028616
PositivePositive_cloneF08F3Author_evidenceNettell JJ
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5216
4182
4348
Pseudo_map_position
Reference (9)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene