WormBase Tree Display for Gene: WBGene00004222
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WBGene00004222 | Evidence | CGC_data_submission | ||||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F44F4 | |||
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | ptr | |||||
Allele (61) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00068055 | |||||
00068056 | ||||||
00068057 | ||||||
00068058 | ||||||
00068059 | ||||||
00068060 | ||||||
00112512 | ||||||
Ortholog (27) | ||||||
Paralog (30) | ||||||
Structured_description | Concise_description | ptr-8 encodes a nematode-specific member of the sterol sensing domain(SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) andhuman PTCH (OMIM:601309, mutated in basal cell nevus syndrome); PTR-8 isweakly required for normal molting from L4 to adult stages; PTR-8 isalso required for normal growth to full size and locomotion; PTR-8 isexpressed in hypodermis. | Paper_evidence | WBPaper00004265 | ||
WBPaper00026596 | ||||||
WBPaper00026841 | ||||||
WBPaper00027263 | ||||||
Curator_confirmed | WBPerson48 | |||||
WBPerson567 | ||||||
Date_last_updated | 08 Nov 2006 00:00:00 | |||||
Automated_description | Involved in molting cycle. Predicted to be located in cytoplasmic vesicle membrane and plasma membrane. Expressed in hypodermis and rectum. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F44F4.4 | ||||
Corresponding_transcript | F44F4.4.1 | |||||
Other_sequence | Name_isotig02160 | |||||
Dviv_isotig21035 | ||||||
Dviv_isotig21036 | ||||||
Acan_isotig07632 | ||||||
Oden_isotig19722 | ||||||
Dviv_isotig20408 | ||||||
Associated_feature | WBsf989520 | |||||
WBsf222082 | ||||||
Experimental_info | RNAi_result | WBRNAi00047323 | Inferred_automatically | RNAi_primary | ||
WBRNAi00001500 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00032261 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00001264 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00076948 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00076916 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00014955 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr2067 | |||||
Expr1017982 | ||||||
Expr1151174 | ||||||
Expr2015174 | ||||||
Expr2033412 | ||||||
Drives_construct | WBCnstr00035627 | |||||
Construct_product | WBCnstr00035627 | |||||
Microarray_results (17) | ||||||
Expression_cluster (216) | ||||||
Interaction | WBInteraction000140439 | |||||
WBInteraction000141398 | ||||||
WBInteraction000351878 | ||||||
WBInteraction000385069 | ||||||
WBInteraction000406657 | ||||||
WBInteraction000407281 | ||||||
WBInteraction000409575 | ||||||
WBInteraction000453122 | ||||||
WBInteraction000472506 | ||||||
Map_info (3) | ||||||
Reference | WBPaper00004265 | |||||
WBPaper00025183 | ||||||
WBPaper00026596 | ||||||
WBPaper00026841 | ||||||
WBPaper00038491 | ||||||
WBPaper00055090 | ||||||
WBPaper00062715 | ||||||
WBPaper00066265 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |