WormBase Tree Display for Gene: WBGene00004184
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WBGene00004184 | Evidence | Accession_evidence | EMBL | AF063401 | |||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T19D2 | ||||
Identity | Version | 4 | |||||
Name | CGC_name | ptp-4A2 | Author_evidence | WBPerson1352 | |||
Sequence_name | T19D2.2 | ||||||
Molecular_name | T19D2.2 | ||||||
T19D2.2.1 | |||||||
CE07515 | |||||||
T19D2.2.2 | |||||||
T19D2.2.3 | |||||||
Other_name | prl-1 | ||||||
CELE_T19D2.2 | Accession_evidence | NDB | BX284606 | ||||
Public_name | ptp-4A2 | ||||||
DB_info | Database (10) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (4) | ||||||
Split_into | WBGene00303102 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ptp | ||||||
Allele (48) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00019469 | ||||||
00019470 | |||||||
00019471 | |||||||
00112427 | |||||||
00112428 | |||||||
Ortholog (45) | |||||||
Paralog | WBGene00000383 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00020444 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable protein tyrosine phosphatase activity. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human PTP4A2 (protein tyrosine phosphatase 4A2). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T19D2.2 | |||||
Corresponding_CDS_history | T19D2.2a:wp264 | ||||||
T19D2.2b:wp264 | |||||||
T19D2.2c:wp264 | |||||||
Corresponding_transcript | T19D2.2.1 | ||||||
T19D2.2.2 | |||||||
T19D2.2.3 | |||||||
Other_sequence (69) | |||||||
Associated_feature | WBsf718556 | ||||||
WBsf718557 | |||||||
WBsf237231 | |||||||
WBsf237232 | |||||||
WBsf237233 | |||||||
Experimental_info | RNAi_result (16) | ||||||
Expr_pattern | Expr1012519 | ||||||
Expr1032044 | |||||||
Expr1157107 | |||||||
Expr2006265 | |||||||
Expr2024483 | |||||||
Drives_construct | WBCnstr00037930 | ||||||
Construct_product | WBCnstr00037930 | ||||||
Antibody | WBAntibody00003049 | ||||||
Microarray_results (25) | |||||||
Expression_cluster (131) | |||||||
Interaction (12) | |||||||
Map_info | Map | X | Position | -9.01614 | Error | 0.069766 | |
Positive | Positive_clone | T19D2 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00023259 | ||||||
WBPaper00038491 | |||||||
WBPaper00038792 | |||||||
WBPaper00040360 | |||||||
WBPaper00055090 | |||||||
WBPaper00065090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
The association of T19D2.2 with prl-1 is incorrect | |||||||
Method | Gene |