WormBase Tree Display for Gene: WBGene00004138
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WBGene00004138 | SMap | S_parent | Sequence | R07B7 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pqn | ||||||
Allele (24) | |||||||
Strain | WBStrain00037780 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00072853 | ||||||
Contained_in_operon | CEOP5320 | ||||||
Ortholog (19) | |||||||
Paralog | WBGene00011088 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||
WBPaper00012788 | |||||||
WBPaper00012830 | |||||||
WBPaper00012882 | |||||||
WBPaper00012897 | |||||||
WBPaper00013003 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Located in nucleus. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | R07B7.3a | |||||
Corresponding_CDS_history | R07B7.3:wp193 | ||||||
Corresponding_transcript | R07B7.3b | ||||||
R07B7.3a.1 | |||||||
Other_sequence (13) | |||||||
Associated_feature | WBsf653183 | ||||||
WBsf653184 | |||||||
WBsf669466 | |||||||
WBsf234614 | |||||||
WBsf234615 | |||||||
WBsf234616 | |||||||
Experimental_info | RNAi_result | WBRNAi00034689 | Inferred_automatically | RNAi_primary | |||
WBRNAi00017521 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00051436 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr9487 | ||||||
Expr1028249 | |||||||
Expr1032012 | |||||||
Expr1155124 | |||||||
Expr2015058 | |||||||
Expr2033293 | |||||||
Drives_construct | WBCnstr00035675 | ||||||
Construct_product | WBCnstr00014052 | ||||||
WBCnstr00035675 | |||||||
Microarray_results (22) | |||||||
Expression_cluster (111) | |||||||
Interaction (22) | |||||||
Map_info | Map | V | Position | 3.62372 | Error | 0.000837 | |
Positive | Positive_clone | R07B7 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00038444 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |