WormBase Tree Display for Gene: WBGene00004128
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| WBGene00004128 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | pqn-41 | Person_evidence | WBPerson625 | |||||
| Sequence_name | F53A3.4 | ||||||||
| Molecular_name (14) | |||||||||
| Other_name | CELE_F53A3.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | pqn-41 | ||||||||
| DB_info | Database | AceView | gene | 3D27 | |||||
| 3C997 | |||||||||
| WormQTL | gene | WBGene00004128 | |||||||
| WormFlux | gene | WBGene00004128 | |||||||
| NDB | locus_tag | CELE_F53A3.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004128|UniProtKB=C7IVR4 | |||||||
| family | PTHR23261 | ||||||||
| NCBI | gene | 175335 | |||||||
| RefSeq | protein | NM_001267920.3 | |||||||
| NM_001129227.4 | |||||||||
| NM_001373851.2 | |||||||||
| NM_065077.6 | |||||||||
| SwissProt | UniProtAcc | C7IVR4 | |||||||
| TREEFAM | TREEFAM_ID | TF343414 | |||||||
| UniProt_GCRP | UniProtAcc | C7IVR4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 28 Aug 2009 09:56:43 | WBPerson1847 | Event | Acquires_merge | WBGene00018722 | ||||
| 3 | 28 Aug 2009 10:01:46 | WBPerson1847 | Event | Acquires_merge | WBGene00044647 | ||||
| 4 | 28 Aug 2009 10:04:11 | WBPerson1847 | Event | Acquires_merge | WBGene00015240 | ||||
| Acquires_merge | WBGene00044647 | ||||||||
| WBGene00015240 | |||||||||
| WBGene00018722 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (923) | |||||||||
| Strain | WBStrain00033253 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00006997 | ||||||||
| 00006998 | |||||||||
| Ortholog (20) | |||||||||
| Paralog (31) | |||||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be located in cytoplasm. Expressed in several structures, including linker cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53A3.4a | |||||||
| F53A3.4b | |||||||||
| F53A3.4c | |||||||||
| F53A3.4d | |||||||||
| Corresponding_CDS_history | F53A3.4:wp183 | ||||||||
| F53A3.4a:wp206 | |||||||||
| F53A3.4b:wp206 | |||||||||
| Corresponding_transcript | F53A3.4a.1 | ||||||||
| F53A3.4b.1 | |||||||||
| F53A3.4c.1 | |||||||||
| F53A3.4d.1 | |||||||||
| F53A3.4d.2 | |||||||||
| F53A3.4d.3 | |||||||||
| Other_sequence (33) | |||||||||
| Associated_feature (32) | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr9990 | ||||||||
| Expr1014335 | |||||||||
| Expr1032003 | |||||||||
| Expr1151867 | |||||||||
| Expr2015052 | |||||||||
| Expr2033287 | |||||||||
| Drives_construct | WBCnstr00014528 | ||||||||
| WBCnstr00014529 | |||||||||
| WBCnstr00014532 | |||||||||
| Microarray_results (69) | |||||||||
| Expression_cluster (144) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | III | Position | -15.7866 | Error | 0.015298 | |||
| Positive | Positive_clone | F53A3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
