WormBase Tree Display for Gene: WBGene00004126
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| WBGene00004126 | SMap | S_parent | Sequence | F48F7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-39 | Person_evidence | WBPerson625 | |||||
| Sequence_name | F48F7.4 | ||||||||
| Molecular_name | F48F7.4 | ||||||||
| F48F7.4.1 | |||||||||
| CE47390 | |||||||||
| Other_name | CELE_F48F7.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | pqn-39 | ||||||||
| DB_info | Database | AceView | gene | XO584 | |||||
| WormQTL | gene | WBGene00004126 | |||||||
| WormFlux | gene | WBGene00004126 | |||||||
| NDB | locus_tag | CELE_F48F7.4 | |||||||
| NCBI | gene | 181506 | |||||||
| RefSeq | protein | NM_077924.5 | |||||||
| TREEFAM | TREEFAM_ID | TF318029 | |||||||
| TrEMBL | UniProtAcc | Q20576 | |||||||
| UniProt_GCRP | UniProtAcc | Q20576 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (59) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (14) | |||||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in ABplpppppp; ABprpppppp; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-12; and eat-2 based on tiling array; RNA-seq; proteomic; and microarray studies. Is affected by four chemicals including Rifampin; allantoin; and silicon dioxide nanoparticle based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F48F7.4 | |||||||
| Corresponding_CDS_history | F48F7.4:wp230 | ||||||||
| Corresponding_transcript | F48F7.4.1 | ||||||||
| Other_sequence | DVC02658_1 | ||||||||
| EV852087.1 | |||||||||
| AYC02234_1 | |||||||||
| AE00486 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047764 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015262 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026648 | ||||||||
| Expr1032001 | |||||||||
| Expr1151597 | |||||||||
| Expr2015051 | |||||||||
| Expr2033286 | |||||||||
| Drives_construct | WBCnstr00035678 | ||||||||
| Construct_product | WBCnstr00035678 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (93) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | X | Position | 15.8767 | |||||
| Positive | Positive_clone | F48F7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
