WormBase Tree Display for Gene: WBGene00004121
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WBGene00004121 | SMap | S_parent | Sequence | F35B3 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ptrn | ||||||
Allele (123) | |||||||
Possibly_affected_by | WBVar02152829 | ||||||
WBVar02153052 | |||||||
Strain | WBStrain00029074 | ||||||
WBStrain00029075 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (21) | |||||||
Ortholog (45) | |||||||
Structured_description | Automated_description | Enables microtubule minus-end binding activity. Involved in cytoplasmic microtubule organization and nematode larval development. Located in microtubule minus-end. Expressed in hypodermis; intestine; nervous system; and pharynx. Human ortholog(s) of this gene implicated in complex cortical dysplasia with other brain malformations. Is an ortholog of human CAMSAP1 (calmodulin regulated spectrin associated protein 1); CAMSAP2 (calmodulin regulated spectrin associated protein family member 2); and CAMSAP3 (calmodulin regulated spectrin associated protein family member 3). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0090131 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:19946) | ||
Molecular_info | Corresponding_CDS | F35B3.5a | |||||
F35B3.5c | |||||||
F35B3.5d | |||||||
F35B3.5e | |||||||
Corresponding_CDS_history | F35B3.5a:wp137 | ||||||
F35B3.5a:wp238 | |||||||
F35B3.5b:wp241 | |||||||
Corresponding_transcript | F35B3.5b | ||||||
F35B3.5a.1 | |||||||
F35B3.5c.1 | |||||||
F35B3.5d.1 | |||||||
F35B3.5e.1 | |||||||
Other_sequence (26) | |||||||
Associated_feature (12) | |||||||
Experimental_info | RNAi_result | WBRNAi00046282 | Inferred_automatically | RNAi_primary | |||
WBRNAi00031747 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014292 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (17) | |||||||
Drives_construct | WBCnstr00019023 | ||||||
WBCnstr00019024 | |||||||
WBCnstr00019026 | |||||||
WBCnstr00019960 | |||||||
WBCnstr00020914 | |||||||
WBCnstr00020915 | |||||||
WBCnstr00020916 | |||||||
WBCnstr00037939 | |||||||
Construct_product (16) | |||||||
Regulate_expr_cluster | WBPaper00056039:ptrn-1(tm5597)_downregulated | ||||||
WBPaper00056039:ptrn-1(tm5597)_upregulated | |||||||
Antibody | WBAntibody00002655 | ||||||
Microarray_results (27) | |||||||
Expression_cluster (121) | |||||||
Interaction (86) | |||||||
Anatomy_function | WBbtf0643 | ||||||
WBbtf0644 | |||||||
WBbtf0645 | |||||||
Map_info | Map | X | Position | 24.0718 | Error | 0.001129 | |
Positive | Positive_clone | F35B3 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference (22) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |