WormBase Tree Display for Gene: WBGene00004111
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| WBGene00004111 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-21 | Person_evidence | WBPerson625 | |||||
| Sequence_name | C37A2.5 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_C37A2.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | pqn-21 | ||||||||
| DB_info | Database | AceView | gene | 1H350 | |||||
| WormQTL | gene | WBGene00004111 | |||||||
| WormFlux | gene | WBGene00004111 | |||||||
| NDB | locus_tag | CELE_C37A2.5 | |||||||
| NCBI | gene | 172398 | |||||||
| RefSeq | protein | NM_001306352.3 | |||||||
| NM_001306351.3 | |||||||||
| NM_059539.6 | |||||||||
| NM_001025858.4 | |||||||||
| TrEMBL | UniProtAcc | S6FD15 | |||||||
| G5EF29 | |||||||||
| S6F562 | |||||||||
| H2KZ82 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZ82 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (49) | |||||||||
| Strain | WBStrain00031442 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00017327 | ||||||||
| 00017328 | |||||||||
| 00017329 | |||||||||
| 00017330 | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable transcription coactivator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Located in nucleus. Expressed in several structures, including body wall musculature; intestine; spermatheca; tail; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C37A2.5a | |||||||
| C37A2.5b | |||||||||
| C37A2.5c | |||||||||
| C37A2.5d | |||||||||
| Corresponding_transcript | C37A2.5a.1 | ||||||||
| C37A2.5b.1 | |||||||||
| C37A2.5c.1 | |||||||||
| C37A2.5d.1 | |||||||||
| Other_sequence | JO471908.1 | ||||||||
| CBC12484_1 | |||||||||
| CR08369 | |||||||||
| CRC04459_1 | |||||||||
| CBC11594_1 | |||||||||
| JI481836.1 | |||||||||
| Associated_feature (13) | |||||||||
| Transcription_factor | WBTranscriptionFactor000882 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00042092 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030637 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092041 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003344 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061748 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003113 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00014271 | ||||||||
| WBCnstr00014274 | |||||||||
| WBCnstr00014275 | |||||||||
| WBCnstr00014304 | |||||||||
| Construct_product | WBCnstr00017345 | ||||||||
| Microarray_results (33) | |||||||||
| Expression_cluster (128) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | I | Position | 1.31522 | Error | 0.000854 | |||
| Positive | Positive_clone | C37A2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4602 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00010427 | ||||||||
| WBPaper00023707 | |||||||||
| WBPaper00027495 | |||||||||
| WBPaper00030162 | |||||||||
| WBPaper00033228 | |||||||||
| WBPaper00034144 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
