WormBase Tree Display for Gene: WBGene00004108
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WBGene00004108 | SMap | S_parent | Sequence | C34E7 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | pqn | |||||
Allele (193) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (16) | ||||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | ||
WBPaper00012788 | ||||||
WBPaper00012830 | ||||||
WBPaper00012882 | ||||||
WBPaper00012897 | ||||||
WBPaper00013003 | ||||||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Enriched in head mesodermal cell; intestine; lateral ganglion; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including stavudine; Zidovudine; and paraquat based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | C34E7.1a | ||||
C34E7.1b | ||||||
C34E7.1c | ||||||
C34E7.1d | ||||||
Corresponding_CDS_history | C34E7.1:wp118 | |||||
Corresponding_transcript (5) | ||||||
Other_sequence | JI466120.1 | |||||
CBC06028_1 | ||||||
Associated_feature (40) | ||||||
Experimental_info | RNAi_result | WBRNAi00041903 | Inferred_automatically | RNAi_primary | ||
WBRNAi00011611 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00029533 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00011612 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00041902 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1027784 | |||||
Expr1031986 | ||||||
Expr1145912 | ||||||
Expr2015036 | ||||||
Expr2033271 | ||||||
Drives_construct | WBCnstr00035690 | |||||
Construct_product | WBCnstr00035690 | |||||
Microarray_results (30) | ||||||
Expression_cluster (156) | ||||||
Interaction | WBInteraction000196403 | |||||
WBInteraction000328747 | ||||||
Map_info | Map | X | Position | 8.93138 | ||
Positive | Positive_clone | C34E7 | Inferred_automatically | From CDS info | ||
From sequence, transcript, pseudogene data | ||||||
Pseudo_map_position | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |