WormBase Tree Display for Gene: WBGene00004108
expand all nodes | collapse all nodes | view schema
WBGene00004108 | SMap | S_parent | Sequence | C34E7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | pqn-18 | Person_evidence | WBPerson625 | |||||
Sequence_name | C34E7.1 | ||||||||
Molecular_name (13) | |||||||||
Other_name | CELE_C34E7.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | pqn-18 | ||||||||
DB_info | Database (8) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pqn | ||||||||
Allele (193) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (16) | |||||||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
WBPaper00012788 | |||||||||
WBPaper00012830 | |||||||||
WBPaper00012882 | |||||||||
WBPaper00012897 | |||||||||
WBPaper00013003 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in head mesodermal cell; intestine; lateral ganglion; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including stavudine; Zidovudine; and paraquat based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS (4) | ||||||||
Corresponding_CDS_history | C34E7.1:wp118 | ||||||||
Corresponding_transcript | C34E7.1a.1 | ||||||||
C34E7.1a.2 | |||||||||
C34E7.1b.1 | |||||||||
C34E7.1c.1 | |||||||||
C34E7.1d.1 | |||||||||
Other_sequence | JI466120.1 | ||||||||
CBC06028_1 | |||||||||
Associated_feature (40) | |||||||||
Experimental_info | RNAi_result | WBRNAi00041903 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011611 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029533 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011612 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041902 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027784 | ||||||||
Expr1031986 | |||||||||
Expr1145912 | |||||||||
Expr2015036 | |||||||||
Expr2033271 | |||||||||
Drives_construct | WBCnstr00035690 | ||||||||
Construct_product | WBCnstr00035690 | ||||||||
Microarray_results (30) | |||||||||
Expression_cluster (156) | |||||||||
Interaction | WBInteraction000196403 | ||||||||
WBInteraction000328747 | |||||||||
Map_info | Map | X | Position | 8.93138 | |||||
Positive | Positive_clone | C34E7 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |